Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15991
- Subject:
- XM_011249734.2
- Aligned Length:
- 1922
- Identities:
- 670
- Gaps:
- 1159
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTACTTTGACCTGAAGGCCCACGAGCTGTGTGGAGGTTACATTAAAGACATCCTTTGCCAGGAGTGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCCTACGCGGCTCACCTCTACGATGCCGAGAACCCCCAGACACCGCTCCGGAACCTTCCGGGCCTCTGCTCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTACTGCTCTGCCTTCCACCGCAGCTGCCACTCGGCCATCTCCTTGCTAACCAATGACCGTGGCCTCCAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCATGGCAAAGATGGTGCTCGCTTCTGTCACCTCCTCAACCTTCCTGACGAGGACTACTGCTTCCCCAATGT 296
Query 1 ----------------------------------ATGGTGGCCCAAGATCCTCAGGGCTGCCTGCAGCTCTGCC 40
.|||||||..|.||.|..||||||||||||||||||||||
Sbjct 297 CCTGAGGAACGATCAACTCAACCGCAACCTGGGAGTGGTGGCTGAGGACCAGCAGGGCTGCCTGCAGCTCTGCC 370
Query 41 TGAGCGAGGTGGCCAACGGGCTGAGGAACCCCGTCTCCATGGTCCATGCTGGGGACGGCACCCATCGCTTCTTT 114
||..||||||||||||.||..||||||||||.||.|||||||||||.||||||||.||||||||.|||||||||
Sbjct 371 TGGTCGAGGTGGCCAATGGCTTGAGGAACCCTGTGTCCATGGTCCACGCTGGGGATGGCACCCACCGCTTCTTT 444
Query 115 GTTGCCGAGCAGGTAGGAGTGGTGTGGGTCTACCTCCCTGATGGGAGTCGCCTGGAGCAACCCTTCCTGGACCT 188
||.||.|||||||||||||||||||||||||||||||||||||||||.||||||||.||.|||||||||||.||
Sbjct 445 GTCGCTGAGCAGGTAGGAGTGGTGTGGGTCTACCTCCCTGATGGGAGCCGCCTGGAACAGCCCTTCCTGGATCT 518
Query 189 CAAGAACATCGTGTTGACCACCCCATGGATCGGGGATGAGAGAGGCTTCTTGGGGTTGGCTTTTCACCCCAAAT 262
|||||.|||.|||.|||||||.||.|||||||||||||||||||||||||||||..|.||||||||||||||||
Sbjct 519 CAAGAGCATGGTGCTGACCACACCGTGGATCGGGGATGAGAGAGGCTTCTTGGGTCTCGCTTTTCACCCCAAAT 592
Query 263 TCCGCCACAATCGCAAGTTCTATATTTATTATTCGTGCCTGGACAAGAAGAAGGTAGAAAAGATCCGAATTAGT 336
||||||||||.|||||||||||.|||||||||||.|||||||.|||||.||||||.||.||.|||||.||||||
Sbjct 593 TCCGCCACAACCGCAAGTTCTACATTTATTATTCATGCCTGGGCAAGAGGAAGGTGGAGAAAATCCGGATTAGT 666
Query 337 GAGATGAAGGTTTCTCGGGCTGATCCTAACAAAGCTGACCTGAAATCAGAG------------------AGGGT 392
||||||||||||||.|.|.||||....||||.|||.||.|..||||||||| |||||
Sbjct 667 GAGATGAAGGTTTCCCTGTCTGACGGCAACAGAGCAGATCCCAAATCAGAGAGTTTCTCTTTCTTTTCCAGGGT 740
Query 393 CATCTTGGAGATTGAAGAACCAGCCTCAAACCATAATGGCGGACAACTTCTTTTTGGCCTGGATGGCTATATGT 466
||||||||||||.||.|||||||||||.|||||.|||||.|||||.|||||.||||||||||||||.|||.|||
Sbjct 741 CATCTTGGAGATAGACGAACCAGCCTCCAACCACAATGGTGGACAGCTTCTCTTTGGCCTGGATGGTTATCTGT 814
Query 467 ACATATTCACTGGGGACGGGGGACAGGCTGGAGATCCCTTTGGCCTGTTTGGAAATGCTCAGAACAAAAGTTCC 540
|||||||||||||||||||.||.||||||||.||||||||||||..|||.|||||||||||||||||||||||.
Sbjct 815 ACATATTCACTGGGGACGGAGGGCAGGCTGGGGATCCCTTTGGCAAGTTCGGAAATGCTCAGAACAAAAGTTCT 888
Query 541 CTGCTGGGAAAAGTTTTAAGGATCGATGTGAACAGGGCAGGCTCAC----ATGGCAAGCGGTACCGAGT-CCCC 609
||||||||.|||||.||||||||.||||||||..|||||| || |||||.||||||||||||| ||||
Sbjct 889 CTGCTGGGGAAAGTGTTAAGGATTGATGTGAATGGGGCAG----ACGTGGATGGCCAGCGGTACCGAGTGCCCC 958
Query 610 TCGGACAATCCATTTGTTTCTGAGCCAGGGGCCCACCCCGCCATCTATGCCTATGGGATCAGGAACATGTGGCG 683
| |||||||||.|||||.|||||||||||.||||||||.|||.|||||||.||.|||.||||.|||||||||||
Sbjct 959 T-GGACAATCCGTTTGTCTCTGAGCCAGGTGCCCACCCTGCCGTCTATGCTTACGGGGTCAGAAACATGTGGCG 1031
Query 684 TTGTGCTGTGGACCGAGGGGACCCCATCACGCGCCAGGGCCGAGGCCGGATATTCTGTGGGGACGTGGGCCAGA 757
.|||||||||||||||||.||||||.||||.|.||.|||||||||.||||||||||||||||||||||||||||
Sbjct 1032 CTGTGCTGTGGACCGAGGAGACCCCGTCACACACCGGGGCCGAGGTCGGATATTCTGTGGGGACGTGGGCCAGA 1105
Query 758 ACAGGTTTGAA--------------------------------------------------------------- 768
|||.|||.||.
Sbjct 1106 ACAAGTTCGAGGAAGTCGACCTTATAGTTAAAGGCGGGAACTATGGCTGGAGAGCCAAGGAAGGGTTTGAATGT 1179
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1180 TATGACAAGAGACTTTGCCGTAATGCGTCCTTGGATGACATTCTGCCCATCTATGCTTATGGCCATGGGGTAGG 1253
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1254 AAAGTCAGTCACTGGAGGGTATGTCTACCGTGGGTGTGAATCCCCCAATCTCAATGGACTCTACATCTTTGGGG 1327
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1328 ACTTCATGAGTGGTCGACTTATGGCTTTGCAGGAAGATAGGAAAACCCAGAAATGGACAAAGCGAGACATCTGC 1401
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1402 TTGGGCAACTCGACCTGCGCCTTCCCGGGGCTGATCAGTGCATACAGCAGGTTCATCATCTCCTTTGCTGAAGA 1475
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1476 TGAAGCAGGAGAGCTGTATTTCCTGGCCACCTCCTACCCAAGTGCCTATGCGCCACATGGATCTATTTACAAGT 1549
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1550 TTGTCGATCCTTCAAGGCGAGCCCCACCAGGCAAGTGCAAATACAAGCCAGTGCCCGTGAAAACCAAGAGTAAG 1623
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1624 AAGGTCCGGTTCCGGCCACTCGCCGCCACAGTCTTGGACTTGCTGAAGGAGGAATCGCAGAAAGCAGCCCGAAA 1697
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1698 AGCATCCAACGCAACCTTCACTTCTAGCTCAGACAGGGTTGCATCTCAGAAGGGCTCCCTCAAGAAGCCAGCTT 1771
Query 769 -------------------------------------------------------------------------- 768
Sbjct 1772 CTTCCCGAAGCAGCAAGAAAACATTTCGAAGGCCTGGTACCAAGAAGAAAAGCAGAGTGTGGTCCCCACGTCCC 1845
Query 769 ------------------------------------------------------------------------ 768
Sbjct 1846 CAGGGCAAGAGGAAGCCCAATCTTGACAGCCATGGTGTAGGGATGAGACAGGCCGCAGGCAGAAGTCACCCA 1917
