Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15997
- Subject:
- NM_001165955.1
- Aligned Length:
- 2858
- Identities:
- 343
- Gaps:
- 2467
Alignment
Query 1 ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCAC 74
|||||||.|||.||.|.|.|.|||||| ||.||||||||||||.||||||||||||||||||||||||||||
Sbjct 1 ATGGATAGTGAGCCGAGCTCTGGAACA---TCCGTGTCAACAACAGCCAGCAGTACCACCACCACCACCATCAC 71
Query 75 CACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGT-------- 140
|||.||||||||.||||||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 72 CACATCCTCCTCCCGAATGCAGCAGCCACAGATCTCTGTCTACAGCGGGTCAGACCGACATGCTGTTCAGGTAA 145
Query 141 ----ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAG 210
.|||||.||||||||||||||||||||.||.|||||||||||.|||||.|||||.||.||.||.||.|||
Sbjct 146 TTCAGCAGGCCTTGCATCGGCCCCCCAGCTCGGCAGCTCAGTACCTGCAGCAGATGTACGCGGCTCAGCAGCAG 219
Query 211 CACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGT 284
|||.||||||||||.||.||.|||||.|||||||||||..||||||||||.|||||.|||||||||||.|||||
Sbjct 220 CACCTGATGCTGCACACGGCTGCTCTGCAGCAGCAGCACCTAAGCAGCTCGCAGCTCCAGAGCCTTGCGGCTGT 293
Query 285 TCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCC 358
.|||||||||||||||||||||||||||||||||||.||||||||.|||||.|||||.||||||||||||||||
Sbjct 294 CCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCCCCCACAGGCAGTGTTACACAACAGTCAAGTATGTCCC 367
Query 359 AAACGTCTGT-AAGTTCCCTAAATTTTTTTTTCCTG-------------GATTTAAA----------------A 402
|.||.|||.| ..||.|.| ||.||||| || |.|| |
Sbjct 368 AGACATCTATCCTGTCCGC---------TTCTCCTGCACCTGCTCAGCTGA--TGAACCGCTCCCAGACGTCCA 430
Query 403 TTT----------------------------------------------------------------------- 405
.||
Sbjct 431 GTTCTACCAGCGGCAGTATTACCCAGCAGACTATGCTACTCGGGAGTACCTCTCCCACCCTAACTGCCAGCCAA 504
Query 406 -------------------------------------------------------------------------- 405
Sbjct 505 GCCCAGATGTATCTCCGAGCTCAGATGGTTCAGAATTTAACCTTACGCAGCCAGAAGCTGGGTGTCTTATCTAG 578
Query 406 -------------------------------------------------------------------------- 405
Sbjct 579 CTCACAGAATGGCTCACCAAAAAGCGCTGGTCAAACCCAGTCCTTGACAATTTGCCATAATAAAACAACAGTGA 652
Query 406 -------------------------------------------------------------------------- 405
Sbjct 653 CCAGTTCTAAAATCAGCCAACGAGACCCTTCTCCAGAGAGCAAGAAGGGAGGAAGCCCAGGTCTGGAATCTCGG 726
Query 406 -------------------------------------------------------------------------- 405
Sbjct 727 AGCACGGCCGTCACTCGGACATCAAGCATCCACCAGTTAATAGCACCAGCTTCATATTCTCCAATTCAGCCTCA 800
Query 406 -------------------------------------------------------------------------- 405
Sbjct 801 TTCTCTAATCAAACATCAGCAGATTCCTCTTCATTCACCACCTCCTAAAGTTTCCCATCATCAGCTGCTATTAC 874
Query 406 -------------------------------------------------------------------------- 405
Sbjct 875 AACAGCAACAACAGCAAATTCAGCCAATCACCCTTCAGAGTCCAAGTCAAGATCCACCCCCATCCCAGCACTGT 948
Query 406 -------------------------------------------------------------------------- 405
Sbjct 949 ATCCCACTCCCAAACCATGGCCTTTCTCCGGCTCCCAGTAATGCCCAGCCGCAGCATTGCTCCCCAGTTCAGAG 1022
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1023 CCATCCTCCGCCTTTAACTGTGTCTCCCAACCAGGCACAGTCCGCACAGCAGTCTGTAGTGGTGTCTCCTCCCC 1096
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1097 CCCCTCATTCCCCAAGTCAGTCTCCTACTATAATTATCCATCCACAAGCACTTATCCAGCCACACCCTCTTGTG 1170
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1171 TCTTCAGCTCTTCAAACAGGGCCAAATTTGCAGCAGGCTGCTGCTGATCAGGTACAGTCCACCGCACAGCTGAA 1244
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1245 TCTTCCATCCCATCTTCCACTTCCAGCATCCCCTGTTGTACACATTGGCCCTGTCCAGCAGTCTGCCTTGGTGT 1318
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1319 CCCCTGGTCAGCAGATGGTGTCCCCAACATCACACCAGCAGTATTCAGCCCTACAGTCCTCTCCAATTCCCATC 1392
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1393 GCGACCCCTCCACAGATGTCGGCATCTCCTCCAGCTCAGCTCCCACCACTGCCCTTGCAGTCTATGCAGTCTTT 1466
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1467 ACAAGTGCAGCCTGAAATTCTATCCCAGGGCCAGGTTTTGGTGCAGAATGCTTTGGTGTCAGAAGAGGAGCTAC 1540
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1541 CTGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCCACAGACTGTTGCGGTAAATCTACAA 1614
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1615 GTACAGCCGCCAGCACCTGTTGATCCACCAGTGGTTTATCAAGTAGAAGATGTGTGTGAGGAAGAAATGCCAGA 1688
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1689 GGAGTCCGATGAGTGTGCAAGGATGGACAGAACCCCCCCACCCCCCACCTTGTCTCCAGCAGCTGTCACTGTGG 1762
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1763 GGAGGGGAGAGGACTTGACATCCGAACATCCTTTGTTAGAGCAAGTGGAGTTGCCTGCTGTGGCCTCAGTCAGT 1836
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1837 GCTTCCGTGATCAAGTCTCCATCAGACCCCACCCATGCCTCTGCTCCTGCACCTCCCCTCTTAATCCCTGCTGC 1910
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1911 CTCCACCAGGAGCAGCAGCACTTCTCTGGCCAGCAGCACTCCCAGCCTGGAAAACAAGCCTCCACAGGCTATTG 1984
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1985 TGAAACCACAGATTTTGACCCACGTTATAGAAGGCTTTGTGATTCAGGAGGGGCTGGAGCCGTTTCCTGTGAGT 2058
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2059 CGATCATCACTGCTGATAGAACAACCTGTGAAGAAGAGGCCTCTCTTGGATAATCAGGTGGTAAACTCTGTGTG 2132
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2133 TGTCCAGCCAGAGTTACAGAATAACACAAAGCATGCAGATAACTCATCCGACACAGAGATAGAAGACATGATGG 2206
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2207 CTGAAGAGACATTGGAAGAAATGGATAGCGAGTTACTCAAGTGTGAATTCTGTGGAAAAATGGGATATCCTAAT 2280
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2281 GAATTTTTACGGTCCAAACGATTCTGTACTATGTCATGTGCCAAAAGGTACAACGTTAGCTGTTCTAAAAAATT 2354
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2355 TGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAGAGTCTTGGGCATCGGGGCCGTCGTCCAAGTGGCCCTG 2428
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2429 AAGGGGCAGCAAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGAAGAAGACGTGGCCTCT 2502
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2503 CATGAAGATCCTGTGCCTTCTGCTATGACGACCCGTCTGCGAAGGCAGAGCGAGCGGGAAAGAGAGCGAGAGCT 2576
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2577 TCGGGATGTGAGGATTAGGAAGATGCCTGAGAATAGTGACTTGCTCCCAGTCGCACAGACTGAGCCCTCCATAT 2650
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2651 GGACAGTCGACGACGTCTGGGCCTTCATCCATTCTTTGCCCGGCTGCCAGGACGTTGCAGATGAGTTCAGGGCA 2724
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2725 CAAGAGATTGATGGGCAGGCCCTGCTCTTGCTAAAAGAAGACCATCTCATGAGTGCAATGAACATGAAGCTGGG 2798
Query 406 ---------------------------------------------- 405
Sbjct 2799 CCCAGCCCTGAAGATTTGTGCACGCATCAACTCTCTGAAGGACTCT 2844
