Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15997
- Subject:
- NM_001165956.1
- Aligned Length:
- 2867
- Identities:
- 343
- Gaps:
- 2476
Alignment
Query 1 ------------------------------------ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC 38
|||||||.|||.||.|.|.|.|||||| ||.|||||
Sbjct 1 ATGGCGGAAGCGGAGTTTAAGGACCACAGCACAGCTATGGATAGTGAGCCGAGCTCTGGAACA---TCCGTGTC 71
Query 39 AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG 112
|||||||.|||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||
Sbjct 72 AACAACAGCCAGCAGTACCACCACCACCACCATCACCACATCCTCCTCCCGAATGCAGCAGCCACAGATCTCTG 145
Query 113 TCTACAGTGGTTCAGACCGACATGCTGT------------ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT 174
|||||||.||.||||||||||||||||| .|||||.||||||||||||||||||||.||.|||
Sbjct 146 TCTACAGCGGGTCAGACCGACATGCTGTTCAGGTAATTCAGCAGGCCTTGCATCGGCCCCCCAGCTCGGCAGCT 219
Query 175 CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA 248
||||||||.|||||.|||||.||.||.||.||.||||||.||||||||||.||.||.|||||.|||||||||||
Sbjct 220 CAGTACCTGCAGCAGATGTACGCGGCTCAGCAGCAGCACCTGATGCTGCACACGGCTGCTCTGCAGCAGCAGCA 293
Query 249 TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC 322
..||||||||||.|||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct 294 CCTAAGCAGCTCGCAGCTCCAGAGCCTTGCGGCTGTCCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCCC 367
Query 323 CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGT-AAGTTCCCTAAATTTTTTTTTCCTG-- 393
|||||||.|||||.|||||.|||||||||||||||||.||.|||.| ..||.|.| ||.|||||
Sbjct 368 CCACAGGCAGTGTTACACAACAGTCAAGTATGTCCCAGACATCTATCCTGTCCGC---------TTCTCCTGCA 432
Query 394 -----------GATTTAAA----------------ATTT----------------------------------- 405
|| |.|| |.||
Sbjct 433 CCTGCTCAGCTGA--TGAACCGCTCCCAGACGTCCAGTTCTACCAGCGGCAGTATTACCCAGCAGACTATGCTA 504
Query 406 -------------------------------------------------------------------------- 405
Sbjct 505 CTCGGGAGTACCTCTCCCACCCTAACTGCCAGCCAAGCCCAGATGTATCTCCGAGCTCAGATGCTGATTTTCAC 578
Query 406 -------------------------------------------------------------------------- 405
Sbjct 579 ACCTGCTACCACTGTGGCTGCTGTACAGTCTGACATCCCTGTTGTCTCGTCGTCACCGTCACCTTCCTGTCAGT 652
Query 406 -------------------------------------------------------------------------- 405
Sbjct 653 CTGCAGCTGCTCAGGTTCAGAATTTAACCTTACGCAGCCAGAAGCTGGGTGTCTTATCTAGCTCACAGAATGGC 726
Query 406 -------------------------------------------------------------------------- 405
Sbjct 727 TCACCAAAAAGCGCTGGTCAAACCCAGTCCTTGACAATTTGCCATAATAAAACAACAGTGACCAGTTCTAAAAT 800
Query 406 -------------------------------------------------------------------------- 405
Sbjct 801 CAGCCAACGAGACCCTTCTCCAGAGAGCAAGAAGGGAGGAAGCCCAGGTCTGGAATCTCGGAGCACGGCCGTCA 874
Query 406 -------------------------------------------------------------------------- 405
Sbjct 875 CTCGGACATCAAGCATCCACCAGTTAATAGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATCAAA 948
Query 406 -------------------------------------------------------------------------- 405
Sbjct 949 CATCAGCAGATTCCTCTTCATTCACCACCTCCTAAAGTTTCCCATCATCAGCTGCTATTACAACAGCAACAACA 1022
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1023 GCAAATTCAGCCAATCACCCTTCAGAGTCCAAGTCAAGATCCACCCCCATCCCAGCACTGTATCCCACTCCCAA 1096
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1097 ACCATGGCCTTTCTCCGGCTCCCAGTAATGCCCAGCCGCAGCATTGCTCCCCAGTTCAGAGCCATCCTCCGCCT 1170
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1171 TTAACTGTGTCTCCCAACCAGGCACAGTCCGCACAGCAGTCTGTAGTGGTGTCTCCTCCCCCCCCTCATTCCCC 1244
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1245 AAGTCAGTCTCCTACTATAATTATCCATCCACAAGCACTTATCCAGCCACACCCTCTTGTGTCTTCAGCTCTTC 1318
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1319 AAACAGGGCCAAATTTGCAGCAGATGGTGTCCCCAACATCACACCAGCAGTATTCAGCCCTACAGTCCTCTCCA 1392
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1393 ATTCCCATCGCGACCCCTCCACAGATGTCGGCATCTCCTCCAGCTCAGCTCCCACCACTGCCCTTGCAGTCTAT 1466
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1467 GCAGTCTTTACAAGTGCAGCCTGAAATTCTATCCCAGGGCCAGGTTTTGGTGCAGAATGCTTTGGTGTCAGAAG 1540
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1541 AGGAGCTACCTGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCCACAGACTGTTGCGGTA 1614
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1615 AATCTACAAGTACAGCCGCCAGCACCTGTTGATCCACCAGTGGTTTATCAAGTAGAAGATGTGTGTGAGGAAGA 1688
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1689 AATGCCAGAGGAGTCCGATGAGTGTGCAAGGATGGACAGAACCCCCCCACCCCCCACCTTGTCTCCAGCAGCTG 1762
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1763 TCACTGTGGGGAGGGGAGAGGACTTGACATCCGAACATCCTTTGTTAGAGCAAGTGGAGTTGCCTGCTGTGGCC 1836
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1837 TCAGTCAGTGCTTCCGTGATCAAGTCTCCATCAGACCCCACCCATGCCTCTGCTCCTGCACCTCCCCTCTTAAT 1910
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1911 CCCTGCTGCCTCCACCAGGAGCAGCAGCACTTCTCTGGCCAGCAGCACTCCCAGCCTGGAAAACAAGCCTCCAC 1984
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1985 AGGCTATTGTGAAACCACAGATTTTGACCCACGTTATAGAAGGCTTTGTGATTCAGGAGGGGCTGGAGCCGTTT 2058
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2059 CCTGTGAGTCGATCATCACTGCTGATAGAACAACCTGTGAAGAAGAGGCCTCTCTTGGATAATCAGGTGGTAAA 2132
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2133 CTCTGTGTGTGTCCAGCCAGAGTTACAGAATAACACAAAGCATGCAGATAACTCATCCGACACAGAGATAGAAG 2206
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2207 ACATGATGGCTGAAGAGACATTGGAAGAAATGGATAGCGAGTTACTCAAGTGTGAATTCTGTGGAAAAATGGGA 2280
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2281 TATCCTAATGAATTTTTACGGTCCAAACGATTCTGTACTATGTCATGTGCCAAAAGGTACAACGTTAGCTGTTC 2354
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2355 TAAAAAATTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAGAGTCTTGGGCATCGGGGCCGTCGTCCAA 2428
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2429 GTGGCCCTGAAGGGGCAGCAAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGAAGAAGAC 2502
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2503 GTGGCCTCTCATGAAGATCCTGTGCCTTCTGCTATGACGACCCGTCTGCGAAGGCAGAGCGAGCGGGAAAGAGA 2576
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2577 GCGAGAGCTTCGGGATGTGAGGATTAGGAAGATGCCTGAGAATAGTGACTTGCTCCCAGTCGCACAGACTGAGC 2650
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2651 CCTCCATATGGACAGTCGACGACGTCTGGGCCTTCATCCATTCTTTGCCCGGCTGCCAGGACGTTGCAGATGAG 2724
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2725 TTCAGGGCACAAGAGATTGATGGGCAGGCCCTGCTCTTGCTAAAAGAAGACCATCTCATGAGTGCAATGAACAT 2798
Query 406 ------------------------------------------------------- 405
Sbjct 2799 GAAGCTGGGCCCAGCCCTGAAGATTTGTGCACGCATCAACTCTCTGAAGGACTCT 2853
