Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15997
- Subject:
- NM_153421.2
- Aligned Length:
- 2957
- Identities:
- 343
- Gaps:
- 2566
Alignment
Query 1 ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCAC 74
|||||||.|||.||.|.|.|.|||||| ||.||||||||||||.||||||||||||||||||||||||||||
Sbjct 1 ATGGATAGTGAGCCGAGCTCTGGAACA---TCCGTGTCAACAACAGCCAGCAGTACCACCACCACCACCATCAC 71
Query 75 CACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGT-------- 140
|||.||||||||.||||||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 72 CACATCCTCCTCCCGAATGCAGCAGCCACAGATCTCTGTCTACAGCGGGTCAGACCGACATGCTGTTCAGGTAA 145
Query 141 ----ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAG 210
.|||||.||||||||||||||||||||.||.|||||||||||.|||||.|||||.||.||.||.||.|||
Sbjct 146 TTCAGCAGGCCTTGCATCGGCCCCCCAGCTCGGCAGCTCAGTACCTGCAGCAGATGTACGCGGCTCAGCAGCAG 219
Query 211 CACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGT 284
|||.||||||||||.||.||.|||||.|||||||||||..||||||||||.|||||.|||||||||||.|||||
Sbjct 220 CACCTGATGCTGCACACGGCTGCTCTGCAGCAGCAGCACCTAAGCAGCTCGCAGCTCCAGAGCCTTGCGGCTGT 293
Query 285 TCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCC 358
.|||||||||||||||||||||||||||||||||||.||||||||.|||||.|||||.||||||||||||||||
Sbjct 294 CCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCCCCCACAGGCAGTGTTACACAACAGTCAAGTATGTCCC 367
Query 359 AAACGTCTGT-AAGTTCCCTAAATTTTTTTTTCCTG-------------GATTTAAA----------------A 402
|.||.|||.| ..||.|.| ||.||||| || |.|| |
Sbjct 368 AGACATCTATCCTGTCCGC---------TTCTCCTGCACCTGCTCAGCTGA--TGAACCGCTCCCAGACGTCCA 430
Query 403 TTT----------------------------------------------------------------------- 405
.||
Sbjct 431 GTTCTACCAGCGGCAGTATTACCCAGCAGACTATGCTACTCGGGAGTACCTCTCCCACCCTAACTGCCAGCCAA 504
Query 406 -------------------------------------------------------------------------- 405
Sbjct 505 GCCCAGATGTATCTCCGAGCTCAGATGCTGATTTTCACACCTGCTACCACTGTGGCTGCTGTACAGTCTGACAT 578
Query 406 -------------------------------------------------------------------------- 405
Sbjct 579 CCCTGTTGTCTCGTCGTCACCGTCACCTTCCTGTCAGTCTGCAGCTGCTCAGGTTCAGAATTTAACCTTACGCA 652
Query 406 -------------------------------------------------------------------------- 405
Sbjct 653 GCCAGAAGCTGGGTGTCTTATCTAGCTCACAGAATGGCTCACCAAAAAGCGCTGGTCAAACCCAGTCCTTGACA 726
Query 406 -------------------------------------------------------------------------- 405
Sbjct 727 ATTTGCCATAATAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGACCCTTCTCCAGAGAGCAAGAAGGG 800
Query 406 -------------------------------------------------------------------------- 405
Sbjct 801 AGGAAGCCCAGGTCTGGAATCTCGGAGCACGGCCGTCACTCGGACATCAAGCATCCACCAGTTAATAGCACCAG 874
Query 406 -------------------------------------------------------------------------- 405
Sbjct 875 CTTCATATTCTCCAATTCAGCCTCATTCTCTAATCAAACATCAGCAGATTCCTCTTCATTCACCACCTCCTAAA 948
Query 406 -------------------------------------------------------------------------- 405
Sbjct 949 GTTTCCCATCATCAGCTGCTATTACAACAGCAACAACAGCAAATTCAGCCAATCACCCTTCAGAGTCCAAGTCA 1022
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1023 AGATCCACCCCCATCCCAGCACTGTATCCCACTCCCAAACCATGGCCTTTCTCCGGCTCCCAGTAATGCCCAGC 1096
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1097 CGCAGCATTGCTCCCCAGTTCAGAGCCATCCTCCGCCTTTAACTGTGTCTCCCAACCAGGCACAGTCCGCACAG 1170
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1171 CAGTCTGTAGTGGTGTCTCCTCCCCCCCCTCATTCCCCAAGTCAGTCTCCTACTATAATTATCCATCCACAAGC 1244
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1245 ACTTATCCAGCCACACCCTCTTGTGTCTTCAGCTCTTCAAACAGGGCCAAATTTGCAGCAGGCTGCTGCTGATC 1318
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1319 AGGTACAGTCCACCGCACAGCTGAATCTTCCATCCCATCTTCCACTTCCAGCATCCCCTGTTGTACACATTGGC 1392
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1393 CCTGTCCAGCAGTCTGCCTTGGTGTCCCCTGGTCAGCAGATGGTGTCCCCAACATCACACCAGCAGTATTCAGC 1466
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1467 CCTACAGTCCTCTCCAATTCCCATCGCGACCCCTCCACAGATGTCGGCATCTCCTCCAGCTCAGCTCCCACCAC 1540
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1541 TGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTATCCCAGGGCCAGGTTTTGGTGCAGAAT 1614
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1615 GCTTTGGTGTCAGAAGAGGAGCTACCTGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCC 1688
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1689 ACAGACTGTTGCGGTAAATCTACAAGTACAGCCGCCAGCACCTGTTGATCCACCAGTGGTTTATCAAGTAGAAG 1762
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1763 ATGTGTGTGAGGAAGAAATGCCAGAGGAGTCCGATGAGTGTGCAAGGATGGACAGAACCCCCCCACCCCCCACC 1836
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1837 TTGTCTCCAGCAGCTGTCACTGTGGGGAGGGGAGAGGACTTGACATCCGAACATCCTTTGTTAGAGCAAGTGGA 1910
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1911 GTTGCCTGCTGTGGCCTCAGTCAGTGCTTCCGTGATCAAGTCTCCATCAGACCCCACCCATGCCTCTGCTCCTG 1984
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1985 CACCTCCCCTCTTAATCCCTGCTGCCTCCACCAGGAGCAGCAGCACTTCTCTGGCCAGCAGCACTCCCAGCCTG 2058
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2059 GAAAACAAGCCTCCACAGGCTATTGTGAAACCACAGATTTTGACCCACGTTATAGAAGGCTTTGTGATTCAGGA 2132
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2133 GGGGCTGGAGCCGTTTCCTGTGAGTCGATCATCACTGCTGATAGAACAACCTGTGAAGAAGAGGCCTCTCTTGG 2206
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2207 ATAATCAGGTGGTAAACTCTGTGTGTGTCCAGCCAGAGTTACAGAATAACACAAAGCATGCAGATAACTCATCC 2280
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2281 GACACAGAGATAGAAGACATGATGGCTGAAGAGACATTGGAAGAAATGGATAGCGAGTTACTCAAGTGTGAATT 2354
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2355 CTGTGGAAAAATGGGATATCCTAATGAATTTTTACGGTCCAAACGATTCTGTACTATGTCATGTGCCAAAAGGT 2428
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2429 ACAACGTTAGCTGTTCTAAAAAATTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAGAGTCTTGGGCAT 2502
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2503 CGGGGCCGTCGTCCAAGTGGCCCTGAAGGGGCAGCAAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCC 2576
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2577 ATCTGCAGAAGAAGACGTGGCCTCTCATGAAGATCCTGTGCCTTCTGCTATGACGACCCGTCTGCGAAGGCAGA 2650
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2651 GCGAGCGGGAAAGAGAGCGAGAGCTTCGGGATGTGAGGATTAGGAAGATGCCTGAGAATAGTGACTTGCTCCCA 2724
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2725 GTCGCACAGACTGAGCCCTCCATATGGACAGTCGACGACGTCTGGGCCTTCATCCATTCTTTGCCCGGCTGCCA 2798
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2799 GGACGTTGCAGATGAGTTCAGGGCACAAGAGATTGATGGGCAGGCCCTGCTCTTGCTAAAAGAAGACCATCTCA 2872
Query 406 ----------------------------------------------------------------------- 405
Sbjct 2873 TGAGTGCAATGAACATGAAGCTGGGCCCAGCCCTGAAGATTTGTGCACGCATCAACTCTCTGAAGGACTCT 2943
