Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15997
- Subject:
- XM_006535470.1
- Aligned Length:
- 2894
- Identities:
- 343
- Gaps:
- 2503
Alignment
Query 1 ------------------------------------ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC 38
|||||||.|||.||.|.|.|.|||||| ||.|||||
Sbjct 1 ATGGCGGAAGCGGAGTTTAAGGACCACAGCACAGCTATGGATAGTGAGCCGAGCTCTGGAACA---TCCGTGTC 71
Query 39 AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG 112
|||||||.|||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||
Sbjct 72 AACAACAGCCAGCAGTACCACCACCACCACCATCACCACATCCTCCTCCCGAATGCAGCAGCCACAGATCTCTG 145
Query 113 TCTACAGTGGTTCAGACCGACATGCTGT------------ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT 174
|||||||.||.||||||||||||||||| .|||||.||||||||||||||||||||.||.|||
Sbjct 146 TCTACAGCGGGTCAGACCGACATGCTGTTCAGGTAATTCAGCAGGCCTTGCATCGGCCCCCCAGCTCGGCAGCT 219
Query 175 CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA 248
||||||||.|||||.|||||.||.||.||.||.||||||.||||||||||.||.||.|||||.|||||||||||
Sbjct 220 CAGTACCTGCAGCAGATGTACGCGGCTCAGCAGCAGCACCTGATGCTGCACACGGCTGCTCTGCAGCAGCAGCA 293
Query 249 TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC 322
..||||||||||.|||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct 294 CCTAAGCAGCTCGCAGCTCCAGAGCCTTGCGGCTGTCCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCCC 367
Query 323 CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGT-AAGTTCCCTAAATTTTTTTTTCCTG-- 393
|||||||.|||||.|||||.|||||||||||||||||.||.|||.| ..||.|.| ||.|||||
Sbjct 368 CCACAGGCAGTGTTACACAACAGTCAAGTATGTCCCAGACATCTATCCTGTCCGC---------TTCTCCTGCA 432
Query 394 -----------GATTTAAA----------------ATTT----------------------------------- 405
|| |.|| |.||
Sbjct 433 CCTGCTCAGCTGA--TGAACCGCTCCCAGACGTCCAGTTCTACCAGCGGCAGTATTACCCAGCAGACTATGCTA 504
Query 406 -------------------------------------------------------------------------- 405
Sbjct 505 CTCGGGAGTACCTCTCCCACCCTAACTGCCAGCCAAGCCCAGATGTATCTCCGAGCTCAGATGGTTCAGAATTT 578
Query 406 -------------------------------------------------------------------------- 405
Sbjct 579 AACCTTACGCAGCCAGAAGCTGGGTGTCTTATCTAGCTCACAGAATGGCTCACCAAAAAGCGCTGGTCAAACCC 652
Query 406 -------------------------------------------------------------------------- 405
Sbjct 653 AGTCCTTGACAATTTGCCATAATAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGACCCTTCTCCAGAG 726
Query 406 -------------------------------------------------------------------------- 405
Sbjct 727 AGCAAGAAGGGAGGAAGCCCAGGTCTGGAATCTCGGAGCACGGCCGTCACTCGGACATCAAGCATCCACCAGTT 800
Query 406 -------------------------------------------------------------------------- 405
Sbjct 801 AATAGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATCAAACATCAGCAGATTCCTCTTCATTCAC 874
Query 406 -------------------------------------------------------------------------- 405
Sbjct 875 CACCTCCTAAAGTTTCCCATCATCAGCTGCTATTACAACAGCAACAACAGCAAATTCAGCCAATCACCCTTCAG 948
Query 406 -------------------------------------------------------------------------- 405
Sbjct 949 AGTCCAAGTCAAGATCCACCCCCATCCCAGCACTGTATCCCACTCCCAAACCATGGCCTTTCTCCGGCTCCCAG 1022
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1023 TAATGCCCAGCCGCAGCATTGCTCCCCAGTTCAGAGCCATCCTCCGCCTTTAACTGTGTCTCCCAACCAGGCAC 1096
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1097 AGTCCGCACAGCAGTCTGTAGTGGTGTCTCCTCCCCCCCCTCATTCCCCAAGTCAGTCTCCTACTATAATTATC 1170
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1171 CATCCACAAGCACTTATCCAGCCACACCCTCTTGTGTCTTCAGCTCTTCAAACAGGGCCAAATTTGCAGCAGGC 1244
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1245 TGCTGCTGATCAGGTACAGTCCACCGCACAGCTGAATCTTCCATCCCATCTTCCACTTCCAGCATCCCCTGTTG 1318
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1319 TACACATTGGCCCTGTCCAGCAGTCTGCCTTGGTGTCCCCTGGTCAGCAGATGGTGTCCCCAACATCACACCAG 1392
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1393 CAGTATTCAGCCCTACAGTCCTCTCCAATTCCCATCGCGACCCCTCCACAGATGTCGGCATCTCCTCCAGCTCA 1466
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1467 GCTCCCACCACTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTATCCCAGGGCCAGGTTT 1540
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1541 TGGTGCAGAATGCTTTGGTGTCAGAAGAGGAGCTACCTGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACT 1614
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1615 CTTCCTCCTCCACAGACTGTTGCGGTAAATCTACAAGTACAGCCGCCAGCACCTGTTGATCCACCAGTGGTTTA 1688
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1689 TCAAGTAGAAGATGTGTGTGAGGAAGAAATGCCAGAGGAGTCCGATGAGTGTGCAAGGATGGACAGAACCCCCC 1762
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1763 CACCCCCCACCTTGTCTCCAGCAGCTGTCACTGTGGGGAGGGGAGAGGACTTGACATCCGAACATCCTTTGTTA 1836
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1837 GAGCAAGTGGAGTTGCCTGCTGTGGCCTCAGTCAGTGCTTCCGTGATCAAGTCTCCATCAGACCCCACCCATGC 1910
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1911 CTCTGCTCCTGCACCTCCCCTCTTAATCCCTGCTGCCTCCACCAGGAGCAGCAGCACTTCTCTGGCCAGCAGCA 1984
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1985 CTCCCAGCCTGGAAAACAAGCCTCCACAGGCTATTGTGAAACCACAGATTTTGACCCACGTTATAGAAGGCTTT 2058
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2059 GTGATTCAGGAGGGGCTGGAGCCGTTTCCTGTGAGTCGATCATCACTGCTGATAGAACAACCTGTGAAGAAGAG 2132
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2133 GCCTCTCTTGGATAATCAGGTGGTAAACTCTGTGTGTGTCCAGCCAGAGTTACAGAATAACACAAAGCATGCAG 2206
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2207 ATAACTCATCCGACACAGAGATAGAAGACATGATGGCTGAAGAGACATTGGAAGAAATGGATAGCGAGTTACTC 2280
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2281 AAGTGTGAATTCTGTGGAAAAATGGGATATCCTAATGAATTTTTACGGTCCAAACGATTCTGTACTATGTCATG 2354
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2355 TGCCAAAAGGTACAACGTTAGCTGTTCTAAAAAATTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAGA 2428
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2429 GTCTTGGGCATCGGGGCCGTCGTCCAAGTGGCCCTGAAGGGGCAGCAAGAGAACATATCCTTAGGCAGCTTCCA 2502
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2503 ATTACTTATCCATCTGCAGAAGAAGACGTGGCCTCTCATGAAGATCCTGTGCCTTCTGCTATGACGACCCGTCT 2576
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2577 GCGAAGGCAGAGCGAGCGGGAAAGAGAGCGAGAGCTTCGGGATGTGAGGATTAGGAAGATGCCTGAGAATAGTG 2650
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2651 ACTTGCTCCCAGTCGCACAGACTGAGCCCTCCATATGGACAGTCGACGACGTCTGGGCCTTCATCCATTCTTTG 2724
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2725 CCCGGCTGCCAGGACGTTGCAGATGAGTTCAGGGCACAAGAGATTGATGGGCAGGCCCTGCTCTTGCTAAAAGA 2798
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2799 AGACCATCTCATGAGTGCAATGAACATGAAGCTGGGCCCAGCCCTGAAGATTTGTGCACGCATCAACTCTCTGA 2872
Query 406 -------- 405
Sbjct 2873 AGGACTCT 2880
