Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15997
- Subject:
- XM_011513187.3
- Aligned Length:
- 2895
- Identities:
- 388
- Gaps:
- 2499
Alignment
Query 1 ------------------------------------ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGAAGCGGAATTTAAGGACCATAGTACAGCTATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC 74
Query 39 AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG 148
Query 113 TCTACAGTGGTTCAGACCGACATGCTGT------------ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT 174
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 149 TCTACAGTGGTTCAGACCGACATGCTGTACAGGTAATTCAACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT 222
Query 175 CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA 296
Query 249 TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC 370
Query 323 CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGT-AAGTTC---------CCTAAATTTTTT 386
||||||||||||||||||||||||||||||||||||||||||||.| ||..|| ||||.|
Sbjct 371 CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTATCAACCTCTCCACTTCTCCTACA------ 438
Query 387 TTTCCTG--GATTTAAAA----TTT------------------------------------------------- 405
|||| .|.||||.| .||
Sbjct 439 ---CCTGCACAGTTAATAAGCCGTTCCCAGGCTTCCAGTTCTACCAGCGGCAGTATTACCCAACAGACTATGTT 509
Query 406 -------------------------------------------------------------------------- 405
Sbjct 510 ACTAGGGAGTACTTCCCCTACCCTAACGGCAAGCCAAGCTCAAATGTATCTCCGAGCTCAAATGGTTCAGAATT 583
Query 406 -------------------------------------------------------------------------- 405
Sbjct 584 TAACATTACGCAGCCAGAAGTTGGGTGTATTATCTAGCTCACAGAATGGTCCACCAAAAAGCACTAGTCAAACT 657
Query 406 -------------------------------------------------------------------------- 405
Sbjct 658 CAGTCATTGACAATTTGTCATAACAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGATCCTTCTCCAGA 731
Query 406 -------------------------------------------------------------------------- 405
Sbjct 732 AAGTAATAAGAAAGGAGAGAGCCCAAGCCTGGAATCACGAAGCACAGCTGTCACCCGGACATCAAGTATTCACC 805
Query 406 -------------------------------------------------------------------------- 405
Sbjct 806 AGTTAATAGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATAAAACATCAGCAGATTCCTCTTCAT 879
Query 406 -------------------------------------------------------------------------- 405
Sbjct 880 TCACCACCTTCCAAAGTTTCCCATCATCAGCTGATATTACAACAGCAGCAACAGCAAATTCAGCCAATCACACT 953
Query 406 -------------------------------------------------------------------------- 405
Sbjct 954 TCAGAATTCAACTCAAGACCCACCCCCATCCCAGCACTGTATACCACTCCAGAACCATGGCCTTCCTCCAGCTC 1027
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1028 CCAGTAATGCCCAGTCACAGCATTGTTCACCGATTCAGAGTCATCCCTCTCCTTTAACAGTGTCTCCTAATCAG 1101
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1102 TCACAGTCAGCACAGCAGTCTGTAGTGGTGTCTCCTCCACCACCTCATTCACCAAGTCAGTCTCCTACTATAAT 1175
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1176 TATTCATCCACAAGCACTTATTCAGCCACACCCTCTTGTGTCATCAGCTCTCCAGCCAGGGCCAAATTTGCAGC 1249
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1250 AGTCCACTGCTAATCAGGTGCAAGCTACAGCACAGTTGAATCTTCCATCCCATCTTCCACTTCCAGCTTCCCCT 1323
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1324 GTTGTACACATTGGCCCAGTTCAGCAGTCTGCCTTGGTATCCCCAGGCCAGCAGATTGTCTCTCCATCACACCA 1397
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1398 GCAATATTCATCCCTGCAGTCCTCTCCAATCCCAATTGCAAGTCCTCCACAGATGTCGACATCTCCTCCAGCTC 1471
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1472 AGATTCCACCACTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTGTCCCAGGGCCAGGTT 1545
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1546 TTGGTGCAGAATGCTTTGGTGTCAGAAGAGGAACTTCCAGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGAC 1619
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1620 TCTTCCTCCTCCACAGACTGTTGCGGTAAACCTACAAGTGCAACCACCAGCACCTGTTGATCCACCAGTGGTTT 1693
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1694 ATCAGGTAGAAGATGTGTGTGAAGAAGAAATGCCAGAAGAGTCAGATGAATGTGTCCGGATGGATAGAACCCCA 1767
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1768 CCACCACCCACTTTGTCTCCAGCAGCTATAACAGTGGGGAGAGGAGAAGATTTGACTTCTGAACATCCTTTGTT 1841
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1842 AGAGCAAGTGGAATTACCTGCTGTGGCATCAGTCAGTGCTTCAGTAATTAAATCTCCATCAGATCCCTCACATG 1915
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1916 TTTCTGTTCCACCACCTCCATTGTTACTTCCAGCTGCCACCACAAGGAGTAACAGTACATCTATGCACAGTAGC 1989
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1990 ATTCCCAGTATAGAGAACAAACCTCCACAGGCTATTGTTAAACCACAGATCCTAACCCATGTTATTGAAGGCTT 2063
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2064 TGTGATTCAGGAGGGATTGGAGCCATTTCCTGTGAGTCGTTCCTCTTTGCTAATAGAACAGCCTGTGAAAAAAC 2137
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2138 GGCCTCTTTTGGATAATCAGGTGATAAATTCAGTGTGTGTTCAGCCAGAGCTACAGAATAATACAAAACATGCG 2211
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2212 GATAATTCATCTGACACAGAGATGGAAGACATGATTGCTGAAGAGACATTAGAAGAAATGGACAGTGAGTTGCT 2285
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2286 CAAGTGTGAATTCTGTGGGAAAATGGGATATGCTAATGAATTTTTGCGGTCAAAACGATTCTGCACTATGTCAT 2359
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2360 GTGCCAAAAGGTACAATGTTAGCTGTTCTAAAAAATTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAA 2433
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2434 AGTCTTGGGCATCGTGGCCGTCGTCCAAGTGGCCCTGATGGGGCAGCGAGAGAACATATCCTTAGGCAGCTTCC 2507
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2508 AATTACTTATCCATCTGCAGAAGAAGACTTGGCTTCTCATGAAGATTCTGTGCCATCTGCTATGACAACTCGTC 2581
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2582 TGCGCAGGCAGAGCGAGCGGGAAAGAGAACGTGAGCTTCGGGATGTGAGAATTCGGAAAATGCCTGAGAACAGT 2655
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2656 GACTTGCTACCAGTTGCACAAACAGAGCCATCTATATGGACAGTTGATGATGTCTGGGCCTTCATCCATTCTTT 2729
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2730 GCCTGGCTGCCAGGATATCGCAGATGAATTCAGAGCACAGGAGATTGATGGACAGGCCCTTCTCTTGCTGAAAG 2803
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2804 AAGACCATCTCATGAGTGCAATGAATATCAAGCTAGGCCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTG 2877
Query 406 --------- 405
Sbjct 2878 AAGGAATCT 2886
