Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_16008
- Subject:
- XM_017009902.2
- Aligned Length:
- 2364
- Identities:
- 1053
- Gaps:
- 1311
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCACTTGATAAATTTCAAACAGTACAGAAAGGTACAAAATGAAAACTCTCCTCTTCTCAAAGACCACTCAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCTTTTGGCCAGTTTATTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTCTGAGTGCAGGCACAGGAATTGGTGTTTCATCAGCTCTTGTTAGCAACCAGAACTCCAACAATGACGATAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAATGCCCAGAATAACAATGCCAACATCCACGACAACAATCACCATCATCCAGATGACTCAGACGAGGAGAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGCATTAAATGAGATGGAAGACATCGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAAGAAGATGGAGAGGTGGTGGCCGAGAGTGGAAATAATACTCCAGCTCACAGCCAGGCAATTATTCCTGTGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTTGATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTGTAGTAAAACCAACCTCAATTACTGTTCATGATT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGAGAGTGATGATGAAGAAGATAGTCTAGAACTCCAAGAAGTCTGGATTCCTAAGAACGGTACTCGGCGTTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTGAACGTGAAGAAAAAACTGGAGAGTCAGTGCAGTCCAGAGAATTGTCAGTAAGTGGAAAAGGCAAGACTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTTCGAAAGAGGTACAACTCCCATCAGATGGGCCAGTCGAAGCAGTTTCCCCTCGAGGAAAGCAGCTGTGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGCTGTCAGGTCACCAGTGAGCAGATCAAAGCCGATATGAAAGCAGCTAGGGATATTCCTGAAAAGAAAAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACAAGGATGTTTATCCCAGCTGCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCAGCTCACACAACACTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTCTCAAAGCCCCGACTTTGTAAGGACGGTGAACAGCGGCGGCTCTTCCGAGCCTAGCCCTACAGAAGTGGATG 1036
Query 1 --------------------------------------------------ATGGAGGAGGGAGATGCAGAGAGT 24
||||||||||||||||||||||||
Sbjct 1037 TGTCCAGGCAGTGTGCCTGCTCCCCCGGTGGGTCAGAGGACTCTGAGGCCATGGAGGAGGGAGATGCAGAGAGT 1110
Query 25 TCTGTCTGCCCCAGATGCTGCTGTCACAGGCCCCAGGAATCCCAAAGGAGAACTAGCAGGTGTTCTGATGAGGA 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTGTCTGCCCCAGATGCTGCTGTCACAGGCCCCAGGAATCCCAAAGGAGAACTAGCAGGTGTTCTGATGAGGA 1184
Query 99 ACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGATGGTACGAGATCCGCCTTTTCCTTTAGGACTC 172
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGAT------------------------------- 1227
Query 173 TGCCACAAGGGGGGTCTTCAGGCCCAGCACATGATGAGAGGACTAATGGGAGTGGCTCTGGGGCTACAGGTGAG 246
Sbjct 1228 -------------------------------------------------------------------------- 1227
Query 247 GACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGACGTGCAGTCTAATGAAGACTACCCTCGGAGGCCCCTAAC 320
Sbjct 1228 -------------------------------------------------------------------------- 1227
Query 321 CAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCTGAGTCAGAAGTAGCCAAAACAAAGCCACGTCACG 394
||||||||||||||||||||||||||||
Sbjct 1228 ----------------------------------------------GAAGTAGCCAAAACAAAGCCACGTCACG 1255
Query 395 CCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGATGACCATGTGCAG 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 CCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGATGACCATGTGCAG 1329
Query 469 GTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAGATCTAGTGCTAAA 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 GTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAGATCTAGTGCTAAA 1403
Query 543 AGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAGGTAGAAAATGCAC 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 AGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAGGTAGAAAATGCAC 1477
Query 617 CAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGACCAGATACTAAGA 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1478 CAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGACCAGATACTAAGA 1551
Query 691 ATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAACTTTGGAGCAGAA 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 ATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAACTTTGGAGCAGAA 1625
Query 765 GCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCCAATGTCCGGAATA 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 GCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCCAATGTCCGGAATA 1699
Query 839 AGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATATGAATTCTTCCCT 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 AGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATATGAATTCTTCCCT 1773
Query 913 GAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAATCTATACTTTAGA 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 GAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAATCTATACTTTAGA 1847
Query 987 AGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGC 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 AGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGC 1921
Query 1061 CCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAGAAGGAAAGGACAG 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 CCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAGAAGGAAAGGACAG 1995
Query 1135 CTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGTATT 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 CTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGTATT 2069
Query 1209 TCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGATGACTACATT 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 TCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGATGACTACATT 2139
