Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_16008
- Subject:
- XM_017317780.1
- Aligned Length:
- 2343
- Identities:
- 1164
- Gaps:
- 1065
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAAGTCTCCTCTTCTCAAGACCACTCGAGGTGGATGCGACTGGTTGATATCAACCTCGTGCGGTGCCATGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTGAAGCTGGATTCTTTTGGCCAGTTTGTTGAATTATTGCCCAGCCTGGAATTTATTTCTCTGGACCAGATGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCGTGAGCCACCCAAGGGCTGTGCTCGAGTTGGTCTGAGTGCAGGAACTGGAATTGGGGTTTCCTCAGCGCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCAGCAACCAGAATTCCAACAATGACAATGACAATAATGCTCCAAATAACAACGCCAACCTCCATGATAACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCACCATCACCCAGATGATTCGGATGACGACAATGACTTTCGTCCAGACCTACAAGCAGGAGAGGCACAATTTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCCGATGCGTTGAATGAGATGGAAGACATGGTCCAGGAAGATGGAGAACTGGTAGCCGAGAGTGGAAATGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCCAGCTCACAATCGGGAAGTTCTTCCTGTGGATGCTGATGAGGAACAAGCAGGACCTAGTGGTCTACAACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGGTAAAACCTACACCAATTGCTGATCACGATTCAGAGAGCGATGATGAAGAAGATAGTTTAGAACTCCAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGTCTGGGCTCCTAAGAATGGCACCCGGCGTTACTCAGAGCGGGAAGAAAAGACTGGAGACTCAGGACAGTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGGAAACGGCAGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAGGCGAAGCCGTTTCCCCTGGAGGAGAGCAGCTGTGAGAAAGGCTGTCAGGTGACCAGTGAGCAGATCAAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCGATATGAAAGCAGCTAGGGATGTTTCTGAAAAGAAAAAATCCAAGGATGTCTATCCCAGCTGCAGCAGCAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCAGCAGCACAGCCGCCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGGACGGTGACCAGCAGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCCAGGCAGTGTGTCTGCT 1036
Query 1 -----------------------------ATGGAGGAGGGAGATGCAGAGAGTTCTGTCTGCCCCAGATGCTGC 45
|||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1037 CCCCTGGTGGGTCAGAGGACTCTGAGGCCATGGAGGAGGGAGATGCAGAGAGCTCTGTCTGCCCCAGATGCTGC 1110
Query 46 TGTCACAGGCCCCAGGAATCCCAAAGGAGAACTAGCAGGTGTTCTGATGAGGAACGTCCTTCAACCAGCCGAGC 119
||||.||||||||||||.||.||||||||||||.|||||||||||||||||||.||||||||||||||||||||
Sbjct 1111 TGTCTCAGGCCCCAGGAGTCTCAAAGGAGAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGC 1184
Query 120 CTGTGTTGTGAATGGCCCGGATGGTACGAGATCCGCCTTTTCCTTTAGGACTCTGCCACAAGGGGGGTCTTCAG 193
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGTGTTGTGAATGGCGCGGATGGTACGAGATCCGCCTTTTCCTTTAGGACTCTGCCACAAGGGGGGTCTTCAG 1258
Query 194 GCCCAGCACATGATGAGAGGACTAATGGGAGTGGCTCTGGGGCTACAGGTGAGGACAGGAGGGGGAGCTCCCAG 267
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCCCAGCACATGATGAGAGGACTAATGGGAGTGGCTGTGGGGCTACAGGTGAGGACAGGAGGGGGAGCTCCCAG 1332
Query 268 CCTGAGAGTTGTGACGTGCAGTCTAATGAAGACTACCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTC 341
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCTGAGAGTTGTGACGTGCAGTCTAATGAAGACTATCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTC 1406
Query 342 CCATGTACTGCTGGTATCTGAGTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAG 415
||||||||.||||.||||||||||||||||.|||||||||||||||.|.||.|||||||||||.|||||.||.|
Sbjct 1407 CCATGTACCGCTGATATCTGAGTCAGAAGTTGCCAAAACAAAGCCATGCCATGCCATGAAACGAAAGCGAACTG 1480
Query 416 CAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGATGACCATGTGCAGGTTCTTGTATTAAAATCCAAG 489
|||||||.||.||.||.||.|||||.||||||||.||.||||||||.||.|||||||||||||||||||||||.
Sbjct 1481 CAGATAAGTCTACCAGCACCAGTGACCCTGTGATTGAAGATGACCACGTACAGGTTCTTGTATTAAAATCCAAA 1554
Query 490 AATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAGATCTAGTGCTAAAAGACTGTCCAAAGATGATGTT 563
|||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||||.||.|||||||||||
Sbjct 1555 AATCTTGTTGGAGTCACAATGACCAATTGTGGAATCACAGATCTAGTACTGAAAGACTGCCCCAAGATGATGTT 1628
Query 564 CATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAGGTAGAAAATGCACCAATTGTAAACCGATTTGACT 637
|||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CATCCATGCTACCAGGTGCAGGGTACTGAAGCATTTAAAGGTAGAAAATGCACCAATTGTAAACCGATTTGACT 1702
Query 638 ATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGACCAGATACTAAGAATGCCACCCGAGAGAAACCGC 711
|||||||||||||||||||.||.|||||.||||||||||||||.|||||.||.|||||.||.|||||.|||||.
Sbjct 1703 ATGCACAGTGCAAGAAACTAAATATGGACCAGGTACTAGACCAAATACTGAGGATGCCTCCGGAGAGGAACCGG 1776
Query 712 ATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAACTTTGGAGCAGAAGCTATTTAGTGGTCCCTACCC 785
|||||.|||||.|||||||||||||||||.|||||.||||||.|||||||||||||.||.||.||.||||||||
Sbjct 1777 ATCATCTACCTGCGCCCAATGCAGCAGGTAGACACACTAACTCTGGAGCAGAAGCTCTTCAGCGGGCCCTACCC 1850
Query 786 CTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCCAATGTCCGGAATAAGGTGCGCATTCGCAGCTGGA 859
||||||||||||.||.|||||.||.|||||.||.||||||||.||.|||||.|||||||||||.||||..||||
Sbjct 1851 CTATCACATCTGCATCATCCACGAGTTCAGCAATCCTCCCAACGTGCGGAACAAGGTGCGCATCCGCAATTGGA 1924
Query 860 TGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATATGAATTCTTCCCTGAAGCCACTCGAAGTGAAGAA 933
|||||||.|||||.||||||||||||||||||||||||||.||||||||||..|||||||||||.|.||||||.
Sbjct 1925 TGGACACGATAGCCAACATCAATCAAGAGCTCATTAAATACGAATTCTTCCTGGAAGCCACTCGGACTGAAGAG 1998
Query 934 GACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAATCTATACTTTAGAAGGTGTTGTGGATGGAGCTCC 1007
||.||||||||.|||||.|||||.||||||||||||||||||||.||||||||.||||||||.||||||||.||
Sbjct 1999 GATTTAAAGAAGTACCCTAAGTATCCCTGGGGGAGAGAAATCTACACTTTAGAGGGTGTTGTAGATGGAGCGCC 2072
Query 1008 ATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACG 1081
.||||||||||||||.|||||||||||||||||||||.|.||..|.|||||||||||||||||.||..||||.|
Sbjct 2073 GTATTCCATGATTTCCGACTTCCCTTGGCTGAGGTCACTGCGGACCGCAGAGCCCAACAGCTTTGCCAGATATG 2146
Query 1082 ACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAGAAGGAAAGGACAGCTGTCTGCAGACATCTGTATG 1155
|.||||||||.||||||||.|||||.||||||||||||.||||.|||||.|||.|||||||||||||.||||||
Sbjct 2147 ATTTTGAAGATGATGAAGAGAGCACCATCTATGCTCCTCGAAGAAAAGGGCAGTTGTCTGCAGACATTTGTATG 2220
Query 1156 GAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTT 1229
||.||||||||||||||.||.|||||||||||.||||||||||.|||..||||||||||||||||.||.|||||
Sbjct 2221 GAGACAATAGGAGAGGAGATCTCAGAGATGCGCCAGATGAAGAGGGGCATATTTCAGCGAGTAGTAGCGATTTT 2294
Query 1230 TATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGATGACTACATT 1278
|||||||||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 2295 TATCCACTACTGTGATGTCAATGGAGAGCCAGTTGAAGACGACTACATT 2343
