Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_16026
- Subject:
- NR_133924.2
- Aligned Length:
- 3546
- Identities:
- 462
- Gaps:
- 3077
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTCAGTGAGACTTTCCTGTCACTGGCTACTACTACTCCCAACCCTCCTCAAAGCCGCCGGAGCAACCCCCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTTTACTTTACAATCGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGGGACCAAGGAAAGTGTGGAGACGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAAGGATTAGGTGATCGGAGCTTGAAAAGAAAAAAAGCCAAACAAATAAACAAAACCCACCCACCCTAACAAA 222
Query 1 -ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAAC 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAAC 296
Query 74 TGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACA 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACA 370
Query 148 ATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCT 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCT 444
Query 222 TTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACAC 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACAC 518
Query 296 CCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATT 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATT 592
Query 370 TTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGTAAGTAA 443
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGG------- 659
Query 444 ACATAGTT-TAAC------------------TTGTCTAT--TACAACTTTTGCTG------------------- 477
.|||.||| |||| ||.||| | |.||.|||.|.|||
Sbjct 660 GCATCGTTATAACACCCCTGCTCCTGCTGCTTTTTCT-TGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTT 732
Query 478 -------------------------------------------------------------------------- 477
Sbjct 733 TTCTCAGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAATAATTCGGGTTTCACACCAGCAGAC 806
Query 478 -------------------------------------------------------------------------- 477
Sbjct 807 ACAGTGGCTATCATTTTCTGTTCTACACACAAATCCCTTACATTGGGAATTCCGATGCTGAAGATCGTGTTTGC 880
Query 478 -------------------------------------------------------------------------- 477
Sbjct 881 AGGCCATGAGCATCTCTCTTTAATATCTGTACCCTTGCTCATCTACCACCCAGCTCAGATCCTTCTGGGAAGTG 954
Query 478 -------------------------------------------------------------------------- 477
Sbjct 955 TGTTGGTGCCAACAATCAAGTCTTGGATGGTATCAAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTATAA 1028
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1029 CAAAGGAGGTGGACTTTCTGTAGCAATGTATATATGTACAGGATTGTACATACTAGCAATTCTGAAGACTTGTA 1102
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1103 CTTGTGAATGTTGCCTCAATGCATATTTTATTTTTTTACACAAAAATATGAGATCCTGTTTAAGTGCCTTAAAA 1176
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1177 TGTATTTGACAAGAGCGTTATTTCCAAAATATGCTTTGTTGATTACTGCCAGGGGTGGTACAATATTTGGGGGT 1250
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1251 TAATTTTGCTTTCCTAATGCAGGAATCAGTCATGGTAAGTGACAAAAAGCAAACATGCTTTCCCTGCAGCACCT 1324
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1325 TTGTGCAATACAACCCTATAGTAGTTACTGTAATGTTTGAAATGAGGTCACACCATCAGGAAAATGCCCTTCTG 1398
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1399 ATGACAGTGAAAATTTCCAAAGTCTTATTCATGCATACTTTGATTTACTGTGTGATTCTTTTTTTCTACGACTG 1472
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1473 TGACATGCCTCTTCCTTATCAACTCAGCAGGGGTCATAGATCGAATAGATGCTGAAAAGCGTAAGATATATGCA 1546
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1547 TTCCTTGACATCATTTTTAAAGACATTCCTTCAAATAGTTTCCACACAGAAATTCCTCACTCCCATTATGAGAG 1620
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1621 ATTGTGGTTATATGTCTTAAATTTATTATAAGCTGCTTCAAAGAAAGGGTCTGAATGTTTGAATTATGAGTGAA 1694
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1695 ATCATGTGAAATTTTGAGTTAAACTCTGTGATTTGATTTTCAGGGTCTTTAAAATATATCTTAATATCTTCTTC 1768
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1769 CTCTTTATTCAATAATTTCTGTCTTGCACTTACACACTCATAACAGCCAAATATGAGGCACAAAAATGTTACAA 1842
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1843 TCAGTTTGAAAGCAGCATCAATTAATGGTAGATTCTATTCACATTCCACAACCCAGACCAAATTTTTTTCCTAT 1916
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1917 TACGCAGATGTGCTGAGCACTTTCCAGATTGCCCCTGTTGGCCAAAAGCAGCCTGTTACATCCTGGAATTAAGC 1990
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1991 ACACTTAAGGTATTTGAGACAATTTATTAATGAAAATTTCCTTGGCAGATTTGACAAATGTTGGCAATATTTTT 2064
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2065 TTAGAAGTTAAATCATATTGCTTTCATGAATAAATGAAAATATAAAGGTCATGGATGCAAACAAATGTTACATA 2138
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2139 TACACATTCTGTCTCTCCAGATGAAAAGAACATGCAAAACCATTTAATAACCAAAATATCAAGTAAAATTAGTT 2212
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2213 CCCAACGGGGCAGCAGCTTTCAAATGAGTGTCCAATATTTGCTTCTGCTATAGCTGCAAGAACTGTAACTGGAC 2286
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2287 CCAAGTAGAGAATGAAGCCACGTATAGAACTACGAGAACACTTTTCTGTGTTTCCCCCATGCCGTCCTGTCACA 2360
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2361 TCCTCTTACACGTCCTCTCTTGATTTGATAGACAATATTGGCATCCTGGGTCTCACTGAGGCCGTGCTATGTCC 2434
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2435 TCAGCAGCTGTTTTTGTTGTTTCGTTATTATGCCCACAACAAAAAATCATTCCTTAGAAACTCACCAAGTTTAT 2508
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2509 CTACTGTGTAAATTTATATTATTGTTACTACCAGGTCTCATCTTTTGTCAATGTCATTGAATAAATTTCATAAG 2582
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2583 AGTTATTCTCAGTGTGAATTTTAAGGCTAATGCCAGATCCTGCAAAAATCTATGCTAACCAGGCTGTAGTACAC 2656
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2657 ACTGTTATAAAGAATTTTACTTGTGTCTAAAACTACAGTAATTTTGCTTAGGTAATTGTGCTTACCTATGGAGC 2730
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2731 ACAGGAAGGCTCTTAGGTTTTGTTCCTACAAGTTTCTTTGAATTTTGGAGTAAATGGAAGTGTCTGTCTGTCTG 2804
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2805 TCATCTATCTGCCCTATCATAAAAATCTTTCTCCCTAACATTAAAATACTGATCCCCGCCCCCAACTTATCTAC 2878
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2879 CTCTATTGTCTAACACCTATAGTAGGTGTGATCATGGGATAAAATTCAACTGAAAATGCTATGATAACATTTTA 2952
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2953 TCGTTTGCTTTAAAAATGTGCTTTGTTTTCAAATAATCTTTACATAGTGAACTTTGGTGGCGTTAGTGATATGT 3026
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3027 TTATGCCTATTTCTTTTTTTTACACAAATTCCTTGGCATATTTTTTCATAAAGAACAAAAAATAAAATCAAAAT 3100
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3101 TTATTTTTAATTCATGCTTATTGGGATTTAATTATTCAGAGCTTAAAATATTTTGTTATGTTTATACACTGTAA 3174
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3175 AGCTATCTGTTTTATGCATTTGTTTTGTCTAAATGTATTTATGAAAGAAATACATTAGATTATATTTATGTTTA 3248
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3249 CTCATTTTTCCACCTGGATTTTTTTTAATGGTTGTTACAAAATTAGATTTTTTAATGGGTAATAATGTTGGTAT 3322
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3323 TTTCATGTTTTTTCTTAGTATTAAAATTTTTGTGGGTTTTTTAAAATTTTTCCCTATTCTGTTAAAAATTAACA 3396
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3397 CACCTCTAGCTAATGTTCAGTGTTTGTGCTAAATACCAAATTTTTTCAAAAGGATTGGTTAAGTCATAAAGTGG 3470
Query 478 -------------------------------------------------------------------- 477
Sbjct 3471 ATTATTTATGATGACTGGAAGATGAAAATAATTATATGATTAAACAAAGAATGTTTCAGAAATCACAA 3538
