Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_16026
- Subject:
- XR_001741332.2
- Aligned Length:
- 3608
- Identities:
- 462
- Gaps:
- 3139
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGCTCAGTGAGACTTTCCTGTCACTGGCTACTACTACTCCCAACCCTCCTCAAAGCCGCCGGAGCAACCCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGTCTTTACTTTACAATCGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGGGACCAAGGAAAGTGTGGAGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCCAAGGATTAGGTGATCGGAGCTTGAAAAGAAAAAAAGCCAAACAAATAAACAAAACCCACCCACCCTAAC 222
Query 1 ----ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAATATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTA 296
Query 71 AACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCA 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCA 370
Query 145 ACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCA 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCA 444
Query 219 TCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCA 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCA 518
Query 293 CACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTG 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTG 592
Query 367 ATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGTAAG 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGG---- 662
Query 441 TAAACATAGTT-TAAC------------------TTGTCTAT--TACAACTTTTGCTG---------------- 477
.|||.||| |||| ||.||| | |.||.|||.|.|||
Sbjct 663 ---GCATCGTTATAACACCCCTGCTCCTGCTGCTTTTTCT-TGGTTCATCTTCTTCTGTGCCTTTCACATCTAT 732
Query 478 -------------------------------------------------------------------------- 477
Sbjct 733 TTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGATTGTCCGAAGATACATCAAGGATT 806
Query 478 -------------------------------------------------------------------------- 477
Sbjct 807 GGCTTGAGAGAAAGAAGCCTCCTTTTGGTGCTATCAGCAGCAGTGTACTCCTCATGATCATCTACACAACATTC 880
Query 478 -------------------------------------------------------------------------- 477
Sbjct 881 TGTGACACGTTCTCTAACCCAAATATTGACCTGGATAAATTCAGCCTTGTTCTCATACTGTTCATAATATTTTC 954
Query 478 -------------------------------------------------------------------------- 477
Sbjct 955 TATCCAGCTGAGTTTTATGCTTTTAACTTTCATCTTTTCAACAAGGAATAATTCGGGTTTCACACCAGCAGACA 1028
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1029 CAGTGGCTATCATTTTCTGTTCTACACACAAATCCCTTACATTGGGAATTCCGATGCTGAAGATCGTGTTTGCA 1102
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1103 GGCCATGAGCATCTCTCTTTAATATCTGTACCCTTGCTCATCTACCACCCAGCTCAGATCCTTCTGGGAAGTGT 1176
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1177 GTTGGTGCCAACAATCAAGTCTTGGATGGTATCAAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTATAAC 1250
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1251 AAAGGAGGTGGACTTTCTGTAGCAATGTATATATGTACAGGATTGTACATACTAGCAATTCTGAAGACTTGTAC 1324
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1325 TTGTGAATGTTGCCTCAATGCATATTTTATTTTTTTACACAAAAATATGAGATCCTGTTTAAGTGCCTTAAAAT 1398
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1399 GTATTTGACAAGAGCGTTATTTCCAAAATATGCTTTGTTGATTACTGCCAGGGGTGGTACAATATTTGGGGGTT 1472
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1473 AATTTTGCTTTCCTAATGCAGGAATCAGTCATGGTAAGTGACAAAAAGCAAACATGCTTTCCCTGCAGCACCTT 1546
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1547 TGTGCAATACAACCCTATAGTAGTTACTGTAATGTTTGAAATGAGGTCACACCATCAGGAAAATGCCCTTCTGA 1620
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1621 TGACAGTGAAAATTTCCAAAGTCTTATTCATGCATACTTTGATTTACTGTGTGATTCTTTTTTTCTACGACTGT 1694
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1695 GACATGCCTCTTCCTTATCAACTCAGCAGGGGTCATAGATCGAATAGATGCTGAAAAGCGTAAGATATATGCAT 1768
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1769 TCCTTGACATCATTTTTAAAGACATTCCTTCAAATAGTTTCCACACAGAAATTCCTCACTCCCATTATGAGAGA 1842
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1843 TTGTGGTTATATGTCTTAAATTTATTATAAGCTGCTTCAAAGAAAGGGTCTGAATGTTTGAATTATGAGTGAAA 1916
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1917 TCATGTGAAATTTTGAGTTAAACTCTGTGATTTGATTTTCAGGGTCTTTAAAATATATCTTAATATCTTCTTCC 1990
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1991 TCTTTATTCAATAATTTCTGTCTTGCACTTACACACTCATAACAGCCAAATATGAGGCACAAAAATGTTACAAT 2064
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2065 CAGTTTGAAAGCAGCATCAATTAATGGTAGATTCTATTCACATTCCACAACCCAGACCAAATTTTTTTCCTATT 2138
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2139 ACGCAGATGTGCTGAGCACTTTCCAGATTGCCCCTGTTGGCCAAAAGCAGCCTGTTACATCCTGGAATTAAGCA 2212
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2213 CACTTAAGATGAAAAGAACATGCAAAACCATTTAATAACCAAAATATCAAGTAAAATTAGTTCCCAACGGGGCA 2286
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2287 GCAGCTTTCAAATGAGTGTCCAATATTTGCTTCTGCTATAGCTGCAAGAACTGTAACTGGACCCAAGTAGAGAA 2360
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2361 TGAAGCCACGTATAGAACTACGAGAACACTTTTCTGTGTTTCCCCCATGCCGTCCTGTCACATCCTCTTACACG 2434
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2435 TCCTCTCTTGATTTGATAGACAATATTGGCATCCTGGGTCTCACTGAGGCCGTGCTATGTCCTCAGCAGCTGTT 2508
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2509 TTTGTTGTTTCGTTATTATGCCCACAACAAAAAATCATTCCTTAGAAACTCACCAAGTTTATCTACTGTGTAAA 2582
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2583 TTTATATTATTGTTACTACCAGGTCTCATCTTTTGTCAATGTCATTGAATAAATTTCATAAGAGTTATTCTCAG 2656
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2657 TGTGAATTTTAAGGCTAATGCCAGATCCTGCAAAAATCTATGCTAACCAGGCTGTAGTACACACTGTTATAAAG 2730
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2731 AATTTTACTTGTGTCTAAAACTACAGTAATTTTGCTTAGGTAATTGTGCTTACCTATGGAGCACAGGAAGGCTC 2804
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2805 TTAGGTTTTGTTCCTACAAGTTTCTTTGAATTTTGGAGTAAATGGAAGTGTCTGTCTGTCTGTCATCTATCTGC 2878
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2879 CCTATCATAAAAATCTTTCTCCCTAACATTAAAATACTGATCCCCGCCCCCAACTTATCTACCTCTATTGTCTA 2952
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2953 ACACCTATAGTAGGTGTGATCATGGGATAAAATTCAACTGAAAATGCTATGATAACATTTTATCGTTTGCTTTA 3026
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3027 AAAATGTGCTTTGTTTTCAAATAATCTTTACATAGTGAACTTTGGTGGCGTTAGTGATATGTTTATGCCTATTT 3100
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3101 CTTTTTTTTACACAAATTCCTTGGCATATTTTTTCATAAAGAACAAAAAATAAAATCAAAATTTATTTTTAATT 3174
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3175 CATGCTTATTGGGATTTAATTATTCAGAGCTTAAAATATTTTGTTATGTTTATACACTGTAAAGCTATCTGTTT 3248
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3249 TATGCATTTGTTTTGTCTAAATGTATTTATGAAAGAAATACATTAGATTATATTTATGTTTACTCATTTTTCCA 3322
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3323 CCTGGATTTTTTTTAATGGTTGTTACAAAATTAGATTTTTTAATGGGTAATAATGTTGGTATTTTCATGTTTTT 3396
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3397 TCTTAGTATTAAAATTTTTGTGGGTTTTTTAAAATTTTTCCCTATTCTGTTAAAAATTAACACACCTCTAGCTA 3470
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3471 ATGTTCAGTGTTTGTGCTAAATACCAAATTTTTTCAAAAGGATTGGTTAAGTCATAAAGTGGATTATTTATGAT 3544
Query 478 -------------------------------------------------------- 477
Sbjct 3545 GACTGGAAGATGAAAATAATTATATGATTAAACAAAGAATGTTTCAGAAATCACAA 3600
