Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_16147
- Subject:
- XM_011526840.2
- Aligned Length:
- 3561
- Identities:
- 1886
- Gaps:
- 1671
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCAAGGACATCAACAGAGTGGGCAAGGTGTGGTCAGAGCTCTTCCACAGCTCCTACGTTTGGAACGTGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGGACTACTTACGTGAAGAGATATTTGCTCTCATCTGCCATTTGGTCACCCAGTGCTATACTTCATATAGGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGCAGGAGAAATACTTGATTCTTTCCCTTTATTTACCAGTTTTCAAGATAATGAATTGGTTCCCTATCCTCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGTGTATCCTGAGTTTGAAGACCAGAGAGCTTGTTTGCCATCAGGATCCTTTCTGACTTGTTCTTCAGACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACCATTCGCTTCTGGAACTTGGACAGCAGCCCTGATTCTCACTGGCAGAAAAACATCTTCAGCAATACCCTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGAAGGTCGTGTACGTGGAGAATGACATCCAGCACCTGCAGGACATGTCACACTTCCCAGACCGGGGGAGCGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGGGACACCCATGGACGTGAAAGCCGGGGTGCGGGTCATGCAGGTCAGTCCTGACGGCCAGCATTTGGCTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCGACCGAAGTGGAAATCTGAGGATCCACGAGCTGCACTTCATGGACGAGCTGGTCAAGGTGGAGGCCCATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGCTGAGGTGCTGTGCCTGGAGTACTCCAAGCCAGAGACGGGGCTGACCTTGCTGGCCTCAGCCAGTCGGGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGGCTGATCCATGTGCTGAACGTGGAGAAGAACTACAACCTGGAGCAGACGCTGGATGACCACTCCTCCTCCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CACCGCCATCAAGTTCGCTGGCAACAGAGACATCCAGATGATCAGCTGTGGGGCTGACAAGAGCATCTACTTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCAGTGCCCAGCAGGGTTCGGATGGACTACACTTTGTCCGTACCCACCACGTAGCAGAGAAAACCACCTTGTAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACATGGACATTGACATCACCCAGAAGTACGTGGCCGTGGCCTGCCAGGACCGCAATGTGAGAGTCTACAACAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTGAACGGGAAGCAGAAGAAGTGCTACAAGGGCTCCCAGGGTGACGAAGGGTCCTTGCTGAAGGTCCATGTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCCCTCAGGCACCTTCCTGGCCACCAGCTGCTCTGACAAAAGCATCTCAGTGATTGACTTTTACTCGGGCGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCATTGCCAAGATGTTTGGCCATTCAGAAATTATTACCAGCATGAAGTTCACCTATGACTGTCATCACTTGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CACAGTATCTGGAGACAGCTGCGTGTTCATCTGGCACCTGGGCCCGGAGATCACCAACTGCATGAAGCAGCACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCTGGAGATTGACCACCGGCAGCAGCAGCAGCACACAAATGACAAGAAGCGGAGTGGCCACCCCAGGCAGGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACGTATGTGTCCACACCTAGTGAGATTCACTCCCTGAGCCCTGGAGAGCAAACAGAGGATGATCTGGAGGAAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGTGAGCCAGAAGAGATGCTGAAGACACCATCCAAAGATAGCTTGGATCCAGATCCTCGTTGCCTGCTAACCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACGGCAAGCTGCCACTGTGGGCAAAGCGGCTGCTAGGGGACGATGATGTGGCAGATGGCTTGGCCTTCCACGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAGCGCAGCTACCAGCCCCACGGCCGCTGGGCAGAGCGGGCCGGCCAAGAGCCCCTCAAGACCATCCTGGATGC 1628
Query 1 ----------------------------ATGAAGCCCGAGAGTCTGGAGAACTCCATTCTGGATTCACTGGAGC 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCAGGACCTGGATTGCTACTTTACCCCCATGAAGCCCGAGAGTCTGGAGAACTCCATTCTGGATTCACTGGAGC 1702
Query 47 CACAGAGCCTGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCAGGAAGCTGGCCGCGGGCACCCCTCCTTCCTG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CACAGAGCCTGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCAGGAAGCTGGCCGCGGGCACCCCTCCTTCCTG 1776
Query 121 CCCCAGCAGAAGGAATCATCTGAGGCCAGTGAGCTCATCCTCTACTCTCTGGAGGCAGAAGTGACAGTCACAGG 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCCCAGCAGAAGGAATCATCTGAGGCCAGTGAGCTCATCCTCTACTCTCTGGAGGCAGAAGTGACAGTCACAGG 1850
Query 195 GACAGACAGCCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCTGGAGACCAGCAGGGCGACTCCTACCTCAGGG 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GACAGACAGCCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCTGGAGACCAGCAGGGCGACTCCTACCTCAGGG 1924
Query 269 TGTCCTCCGACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTCGGGGGAGTCAGAGGCCGACCTGGAGTGCAGC 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TGTCCTCCGACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTCGGGGGAGTCAGAGGCCGACCTGGAGTGCAGC 1998
Query 343 TTCGCAGCCATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCCCTCGGTTTGCCACGTCGCTGCCCCATTTCCC 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TTCGCAGCCATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCCCTCGGTTTGCCACGTCGCTGCCCCATTTCCC 2072
Query 417 AGGATGCGCAGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAGGGACCCAGCGTCCCCAGCAGCTCCCTACCCC 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AGGATGCGCAGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAGGGACCCAGCGTCCCCAGCAGCTCCCTACCCC 2146
Query 491 AGACTCCGGAGCAGGAGAAGTTCCTCCGCCACCACTTTGAGACACTGACTGAGTCCCCCTGCAG---------- 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AGACTCCGGAGCAGGAGAAGTTCCTCCGCCACCACTTTGAGACACTGACTGAGTCCCCCTGCAGAGAGCTCTTC 2220
Query 555 -----AGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACCACTTCTTCAACCCACGCCTGAGTATCTCCAC 623
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CCCGCAGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACCACTTCTTCAACCCACGCCTGAGTATCTCCAC 2294
Query 624 GCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCATACCTTCCCTCCCCGGGCAACCCAGTGCCTTG 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCATACCTTCCCTCCCCGGGCAACCCAGTGCCTTG 2368
Query 698 TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGAGCAGGTACTGGCTACGCCTCCCCA 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGAGCAGGTACTGGCTACGCCTCCCCA 2442
Query 772 GACAGGACCCACGTCCTTGCTGCAGGGAAGGCTGAAGAGACCCTGGAGGCCTGGCGCCCACCACCTCCCTGCCT 845
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GACAGGACCCACGTCCTCGCTGCAGGGAAGGCTGAAGAGACCCTGGAGGCCTGGCGCCCACCACCTCCCTGCCT 2516
Query 846 TACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCCACAGACAGGAATCTCCCAACGCCCACATCTG 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCCACAGACAGGAATCTCCCAACGCCCACATCTG 2590
Query 920 CACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCACCTGTTCCTACATGGAGGCCACTGCCAGCTCC 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCACCTGTTCCTACATGGAGGCCACTGCCAGCTCC 2664
Query 994 CGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGGGCCCTATCGTGGCCACACTGGCCCAGCCCCT 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGGGCCCTATCGTGGCCACACTGGCCCAGCCCCT 2738
Query 1068 CCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAGGAGCTTCAGGCCATCACCACCGCGACAACAC 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAGGAGCTTCAGGCCATCACCACCGCGACAACAC 2812
Query 1142 CCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTGGGGCAACCACGAGGCCCGGGCCAACCTGAGA 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTGGGGCAACCACGAGGCCCGGGCCAACCTGAGA 2886
Query 1216 CTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCTGCCCCCCGTGGATACCCAGCCTGGCGTCACCGTCCCTGC 1289
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCAGCCCCCCGTGGATACCCAGCCTGGCGTCACCGTCCCTGC 2960
Query 1290 AGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTGAGGCTCCACGGCTCTGCCTTTCGCCCAAGTC 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 AGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTGAGGCTCCACGGCTCTGCCTTTCGCCCAAGTC 3034
Query 1364 TCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAACCCCCAGCTTCCAGAGGCCCGGCCTGGCATC 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAACCCCCAGCTTCCAGAGGCCCGGCCTGGCATC 3108
Query 1438 CCTGGCAGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCACTTGGTCTGTTCCAGGGCAGCCCTGCCCGCTG 1511
||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 3109 CCTGGCGGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCACTTGGTCTGTTACAGGGCAGCCCTGCCCGCTG 3182
Query 1512 GAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCCCTTGAGCTGAGCAGGGTGGGGAACATCTTGC 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCCCTTGAGCTGAGCAGGGTGGGGAACATCTTGC 3256
Query 1586 ACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCGTGTGTTGGTCTCCAGTGGCCAGGTGGACACC 1659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 ACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCGTGTGTTGGTCTCCAGTGGCCAGGTGGACACC 3330
Query 1660 GGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGTGGATCCACAGCCAGCTGGAGGCTGAATGCCT 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGTGGATCCACAGCCAGCTGGAGGCTGAATGCCT 3404
Query 1734 GGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCAGGACCCCCGTCCCCACCGACGCTGTACCCCC 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 GGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCAGGACCCCCGTCCCCACCGACGCTGTACCCCC 3478
Query 1808 TGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGAGCTGCTGGTGCAGGCCGTGCGGAGGAAGGCA 1881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 TGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGAGCTGCTGGTGCAGGCCGTGCGGAGGAAGGCA 3552
Query 1882 CGGGGGCAC 1890
|||||||||
Sbjct 3553 CGGGGGCAC 3561
