Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_16147
- Subject:
- XM_011526841.2
- Aligned Length:
- 3147
- Identities:
- 1886
- Gaps:
- 1257
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCACACTTCCCAGACCGGGGGAGCGAGAATGGGACACCCATGGACGTGAAAGCCGGGGTGCGGGTCATGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTCAGTCCTGACGGCCAGCATTTGGCTTCAGGCGACCGAAGTGGAAATCTGAGGATCCACGAGCTGCACTTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGACGAGCTGGTCAAGGTGGAGGCCCATGATGCTGAGGTGCTGTGCCTGGAGTACTCCAAGCCAGAGACGGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGACCTTGCTGGCCTCAGCCAGTCGGGACCGGCTGATCCATGTGCTGAACGTGGAGAAGAACTACAACCTGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGACGCTGGATGACCACTCCTCCTCCATCACCGCCATCAAGTTCGCTGGCAACAGAGACATCCAGATGATCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGTGGGGCTGACAAGAGCATCTACTTTCGCAGTGCCCAGCAGGGTTCGGATGGACTACACTTTGTCCGTACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACCACGTAGCAGAGAAAACCACCTTGTATGACATGGACATTGACATCACCCAGAAGTACGTGGCCGTGGCCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCAGGACCGCAATGTGAGAGTCTACAACACTGTGAACGGGAAGCAGAAGAAGTGCTACAAGGGCTCCCAGGGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACGAAGGGTCCTTGCTGAAGGTCCATGTGGACCCCTCAGGCACCTTCCTGGCCACCAGCTGCTCTGACAAAAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCTCAGTGATTGACTTTTACTCGGGCGAGTGCATTGCCAAGATGTTTGGCCATTCAGAAATTATTACCAGCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAAGTTCACCTATGACTGTCATCACTTGATCACAGTATCTGGAGACAGCTGCGTGTTCATCTGGCACCTGGGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGGAGATCACCAACTGCATGAAGCAGCACTTGCTGGAGATTGACCACCGGCAGCAGCAGCAGCACACAAATGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAAGCGGAGTGGCCACCCCAGGCAGGATACGTATGTGTCCACACCTAGTGAGATTCACTCCCTGAGCCCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGCAAACAGAGGATGATCTGGAGGAAGAGTGTGAGCCAGAAGAGATGCTGAAGACACCATCCAAAGATAGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGATCCAGATCCTCGTTGCCTGCTAACCAACGGCAAGCTGCCACTGTGGGCAAAGCGGCTGCTAGGGGACGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATGTGGCAGATGGCTTGGCCTTCCACGCCAAGCGCAGCTACCAGCCCCACGGCCGCTGGGCAGAGCGGGCCGG 1184
Query 1 ----------------------------------------------------------ATGAAGCCCGAGAGTC 16
||||||||||||||||
Sbjct 1185 CCAAGAGCCCCTCAAGACCATCCTGGATGCCCAGGACCTGGATTGCTACTTTACCCCCATGAAGCCCGAGAGTC 1258
Query 17 TGGAGAACTCCATTCTGGATTCACTGGAGCCACAGAGCCTGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCAG 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGAGAACTCCATTCTGGATTCACTGGAGCCACAGAGCCTGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCAG 1332
Query 91 GAAGCTGGCCGCGGGCACCCCTCCTTCCTGCCCCAGCAGAAGGAATCATCTGAGGCCAGTGAGCTCATCCTCTA 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAAGCTGGCCGCGGGCACCCCTCCTTCCTGCCCCAGCAGAAGGAATCATCTGAGGCCAGTGAGCTCATCCTCTA 1406
Query 165 CTCTCTGGAGGCAGAAGTGACAGTCACAGGGACAGACAGCCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCTG 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CTCTCTGGAGGCAGAAGTGACAGTCACAGGGACAGACAGCCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCTG 1480
Query 239 GAGACCAGCAGGGCGACTCCTACCTCAGGGTGTCCTCCGACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTCG 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GAGACCAGCAGGGCGACTCCTACCTCAGGGTGTCCTCCGACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTCG 1554
Query 313 GGGGAGTCAGAGGCCGACCTGGAGTGCAGCTTCGCAGCCATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCCC 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGGGAGTCAGAGGCCGACCTGGAGTGCAGCTTCGCAGCCATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCCC 1628
Query 387 TCGGTTTGCCACGTCGCTGCCCCATTTCCCAGGATGCGCAGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAGG 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TCGGTTTGCCACGTCGCTGCCCCATTTCCCAGGATGCGCAGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAGG 1702
Query 461 GACCCAGCGTCCCCAGCAGCTCCCTACCCCAGACTCCGGAGCAGGAGAAGTTCCTCCGCCACCACTTTGAGACA 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GACCCAGCGTCCCCAGCAGCTCCCTACCCCAGACTCCGGAGCAGGAGAAGTTCCTCCGCCACCACTTTGAGACA 1776
Query 535 CTGACTGAGTCCCCCTGCAG---------------AGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACCA 593
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTGACTGAGTCCCCCTGCAGAGAGCTCTTCCCCGCAGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACCA 1850
Query 594 CTTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCATA 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CTTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCATA 1924
Query 668 CCTTCCCTCCCCGGGCAACCCAGTGCCTTGTGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAG 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCTTCCCTCCCCGGGCAACCCAGTGCCTTGTGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAG 1998
Query 742 CCCAGAGCAGGTACTGGCTACGCCTCCCCAGACAGGACCCACGTCCTTGCTGCAGGGAAGGCTGAAGAGACCCT 815
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1999 CCCAGAGCAGGTACTGGCTACGCCTCCCCAGACAGGACCCACGTCCTCGCTGCAGGGAAGGCTGAAGAGACCCT 2072
Query 816 GGAGGCCTGGCGCCCACCACCTCCCTGCCTTACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCCA 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGAGGCCTGGCGCCCACCACCTCCCTGCCTTACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCCA 2146
Query 890 CAGACAGGAATCTCCCAACGCCCACATCTGCACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCACC 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CAGACAGGAATCTCCCAACGCCCACATCTGCACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCACC 2220
Query 964 TGTTCCTACATGGAGGCCACTGCCAGCTCCCGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGGG 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TGTTCCTACATGGAGGCCACTGCCAGCTCCCGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGGG 2294
Query 1038 CCCTATCGTGGCCACACTGGCCCAGCCCCTCCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAGG 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CCCTATCGTGGCCACACTGGCCCAGCCCCTCCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAGG 2368
Query 1112 AGCTTCAGGCCATCACCACCGCGACAACACCCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTGG 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 AGCTTCAGGCCATCACCACCGCGACAACACCCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTGG 2442
Query 1186 GGCAACCACGAGGCCCGGGCCAACCTGAGACTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCTGCCCCCCGT 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2443 GGCAACCACGAGGCCCGGGCCAACCTGAGACTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCAGCCCCCCGT 2516
Query 1260 GGATACCCAGCCTGGCGTCACCGTCCCTGCAGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTGA 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGATACCCAGCCTGGCGTCACCGTCCCTGCAGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTGA 2590
Query 1334 GGCTCCACGGCTCTGCCTTTCGCCCAAGTCTCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAAC 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GGCTCCACGGCTCTGCCTTTCGCCCAAGTCTCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAAC 2664
Query 1408 CCCCAGCTTCCAGAGGCCCGGCCTGGCATCCCTGGCAGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCACT 1481
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 2665 CCCCAGCTTCCAGAGGCCCGGCCTGGCATCCCTGGCGGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCACT 2738
Query 1482 TGGTCTGTTCCAGGGCAGCCCTGCCCGCTGGAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCCC 1555
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 TGGTCTGTTACAGGGCAGCCCTGCCCGCTGGAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCCC 2812
Query 1556 TTGAGCTGAGCAGGGTGGGGAACATCTTGCACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCGT 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TTGAGCTGAGCAGGGTGGGGAACATCTTGCACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCGT 2886
Query 1630 GTGTTGGTCTCCAGTGGCCAGGTGGACACCGGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGTG 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GTGTTGGTCTCCAGTGGCCAGGTGGACACCGGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGTG 2960
Query 1704 GATCCACAGCCAGCTGGAGGCTGAATGCCTGGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCAG 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GATCCACAGCCAGCTGGAGGCTGAATGCCTGGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCAG 3034
Query 1778 GACCCCCGTCCCCACCGACGCTGTACCCCCTGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGAG 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 GACCCCCGTCCCCACCGACGCTGTACCCCCTGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGAG 3108
Query 1852 CTGCTGGTGCAGGCCGTGCGGAGGAAGGCACGGGGGCAC 1890
|||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CTGCTGGTGCAGGCCGTGCGGAGGAAGGCACGGGGGCAC 3147
