Construct: sgRNA BRDN0001144753

Construct Description:

Construct Type:
sgRNA
Other Identifiers:
n/a
DNA Barcode:
AACATCATCACTTTCAAGTG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
MAP3K12 (7786)
Gene Description:
n/a
CRISPR Mechanism
CRISPRko

Vector Information:

Vector Backbone:
pXPR_003
Pol II Cassette 1:
EF1A-PuroR
Pol II Cassette 2:
n/a
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Additional Information:

Addgene ID:
76760

Gene matches for this target sequence (CRISPRko, PAM=NGG, human):

Reference Sequence Chromosome Cut Position Match Strand Match Gene Match Sequence PAM Seq. Mismatches[?] CFD Score[?] Match Tier[?]
1 NC_000012.12 12 53486439 - MAP3K12 NNNATCATCACTTTCAAGTG NGG 0 1.0 Tier I
2 NC_000007.14 7 94664600 - PEG10 NNNAGCATCACTTGCAAGTG NGG 2 0.0 Tier I
3 NC_000020.11 20 56482143 - RTF2 NNNATCATCAATTTCAAGTG NGG 1 0.75 Tier II
4 NC_000021.9 21 37148993 - TTC3 NNNATCAAAACTTTCAAGTG NGG 2 0.6857 Tier II
5 NC_000016.10 16 10571457 + EMP2 NNNATCATTACTTTCAGGTG NGG 2 0.1544 Tier II
6 NC_000007.14 7 95491825 - ASB4 NNNATCATCACTTTAAAATG NGG 2 0.1538 Tier II
7 NC_000002.12 2 153082386 - GALNT13 NNNATCCTCCCTTTCAAGTG NGG 2 0.1458 Tier II
8 NC_000023.11 X 29951346 + IL1RAPL1 NNNATCATCACTTCCAACTG NGG 2 0.1361 Tier II
9 NC_000001.11 1 22658379 + C1QB NNNATCATCACTTCCAAGAG NGG 2 0.0816 Tier II
10 NC_000003.12 3 124677260 - KALRN NNNATCATCAGTTTCAGGTG NGG 2 0.0441 Tier II
11 NC_000006.12 6 114329200 + HS3ST5 NNNAGCATCACTTTGAAGTG NGG 2 0.032 Tier II
12 NC_000011.10 11 99959231 + CNTN5 NNNATCATCAATTTCAAGTG NGC 2 0.0167 Tier II
13 NC_000002.12 2 9952982 - GRHL1 NNNATCATCACTTTCAGGTG NGC 2 0.0039 Tier II
14 NC_000019.10 19 56394553 - ZNF582-DT NNNATCCTCACTTTCAAATG NGG 2 0.3029 Tier III
15 NC_000011.10 11 33903269 - LOC105376621 NNNTTCATCACTTTCAAGTC NGG 2 0.2727 Tier III
16 NC_000002.12 2 52268691 + NRXN1-DT NNNATCATCAGTTTCAAGTA NGG 2 0.2344 Tier III
17 NC_000001.11 1 187252980 - LINC01036 NNNATAATCACTTTCAAGTG NGA 2 0.0645 Tier III
18 NC_000008.11 8 133895351 + LOC101927822 NNNAACATCACTTTCAAGTG NGA 2 0.0347 Tier III
19 NC_000006.12 6 114329200 + HDAC2-AS2 NNNAGCATCACTTTGAAGTG NGG 2 0.032 Tier III
20 NC_000001.11 1 34631964 + LOC105378641 NNNATCATCACTTTCATGTG NGT 2 0.0022 Tier III
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Gene matches for this target sequence (CRISPRko, PAM=NGG, mouse):

Reference Sequence Chromosome Cut Position Match Strand Match Gene Match Sequence PAM Seq. Mismatches[?] CFD Score[?] Match Tier[?]
1 NC_000081.6 15 102504470 - Map3k12 NNNATCATCACTTTCAAGTG NGG 0 1.0 Tier I
2 NC_000071.6 5 148524887 + Ubl3 NNNATCATAACTCTCAAGTG NGG 2 0.6767 Tier II
3 NC_000068.7 2 73380179 - Gpr155 NNNATTATCACTTTCAAATG NGG 2 0.6429 Tier II
4 NC_000076.6 10 103200082 + Lrriq1 NNNGTCATCACTTTCAAATG NGG 2 0.4327 Tier II
5 NC_000068.7 2 25911670 + Kcnt1 NNNCTCATCACCTTCAAGTG NGG 2 0.3344 Tier II
6 NC_000077.6 11 55335536 - Fat2 NNNAGCCTCACTTTCAAGTG NGG 2 0.28 Tier II
7 NC_000067.6 1 153467666 - Dhx9 NNNTTCTTCACTTTCAAGTG NGG 2 0.2784 Tier II
8 NC_000072.6 6 12730231 - Thsd7a NNNATCATCACTTTCAAGCA NGG 2 0.2586 Tier II
9 NC_000076.6 10 112360090 + Kcnc2 NNNATGATCACTTTCACGTG NGG 2 0.0882 Tier II
10 NC_000073.6 7 18718812 - Psg22 NNNATCATCACTTTCAAGTG NGA 1 0.0694 Tier II
11 NC_000073.6 7 18797761 + Psg19 NNNATCATTACTTTCAAGTG NGA 2 0.0608 Tier II
12 NC_000080.6 14 34471433 + Bmpr1a NNNTTCATCACTTTCAAGTG NTG 2 0.0248 Tier II
13 NC_000068.7 2 82220042 + Zfp804a NNNATGATCACTTTCAAGTG NTG 2 0.0195 Tier II
14 NC_000083.6 17 12295465 + Map3k4 NNNATTATCACTTTCAAGTG NGT 2 0.015 Tier II
15 NC_000068.7 2 33794736 - Mvb12b NNNATCATCACTTACAAGTG NGC 2 0.0138 Tier II
16 NC_000075.6 9 104786724 - Cpne4 NNNAACATCACTTTCAAGTG NGT 2 0.0081 Tier II
17 NC_000079.6 13 14131558 + Arid4b NNNATCATCACTGTCAAGTG NGT 2 0.0042 Tier II
18 NC_000078.6 12 40464951 + Dock4 NNNATCATCACTTTCCAGTG NGT 2 0.0 Tier II
19 NC_000083.6 17 34951020 + 1110038B12Rik NNNATCATCACTCTCAATTG NGG 2 0.5263 Tier III
20 NC_000077.6 11 19066233 + 4933406G16Rik NNNATCATGACTTTCAAGTT NGG 2 0.4333 Tier III
21 NC_000079.6 13 97467782 + Lncenc1 NNNGACATCACTTTCAAGTG NGG 2 0.3125 Tier III
22 NC_000072.6 6 54355089 + 9130019P16Rik NNNATCATCACTGCCAAGTG NGG 2 0.0745 Tier III
23 NC_000072.6 6 93025323 - 9530026P05Rik NNNATCAGCACTTTCAAGTG NGA 2 0.0509 Tier III
24 NC_000068.7 2 33794736 - Gm33856 NNNATCATCACTTACAAGTG NGC 2 0.0138 Tier III
25 NC_000067.6 1 61342171 + LOC105243939 NNNATCACCACTTTCCAGTG NGG 2 0.0 Tier III
Download CSV

Other clones with same target sequence:

(none)