Construct: sgRNA BRDN0001145707

Construct Description:

Construct Type:
sgRNA
Other Identifiers:
n/a
DNA Barcode:
GATGTAGGCAATCACTCCGA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CAMK1D (57118)
Gene Description:
n/a
CRISPR Mechanism
CRISPRko

Vector Information:

Vector Backbone:
pXPR_003
Pol II Cassette 1:
EF1A-PuroR
Pol II Cassette 2:
n/a
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Additional Information:

Addgene ID:
77444

Gene matches for this target sequence (CRISPRko, PAM=NGG, human):

Reference Sequence Chromosome Cut Position Match Strand Match Gene Match Sequence PAM Seq. Mismatches[?] CFD Score[?] Match Tier[?]
1 NC_000010.11 10 12791215 - CAMK1D NNNGTAGGCAATCACTCCGA NGG 0 1.0 Tier I
2 NC_000011.10 11 9008270 - NRIP3-DT NNNGTTGGCAATCACTCTGA NGG 2 0.4592 Tier III
3 NC_000023.11 X 102568245 + NXF4 NNNGTAGGCAATCTCTCCAA NGG 2 0.381 Tier III
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Gene matches for this target sequence (CRISPRko, PAM=NGG, mouse):

Reference Sequence Chromosome Cut Position Match Strand Match Gene Match Sequence PAM Seq. Mismatches[?] CFD Score[?] Match Tier[?]
1 NC_000083.6 17 63322433 + Fbxl17 NNNGCAGGCAATCACTTCGA NGG 2 0.4667 Tier II
2 NC_000083.6 17 78606528 + Vit NNNGTTGGCAAGCACTCCGA NGG 2 0.3571 Tier II
3 NC_000067.6 1 176990977 + Sdccag8 NNNGTAGGCAATCACTCCTC NGG 2 0.1515 Tier II
4 NC_000082.6 16 59718234 - Epha6 NNNGTAGGCAAGCACTCCGC NGG 2 0.1136 Tier II
5 NC_000069.6 3 147145563 - Gm29771 NNNGGAGGCAATCACTCAGA NGG 2 0.3446 Tier III
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Other clones with same target sequence:

(none)