Construct: sgRNA BRDN0001147429

Construct Description:

Construct Type:
sgRNA
Other Identifiers:
n/a
DNA Barcode:
ACTTAACCCTCTCACAGCAG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PIK3CG (5294)
Gene Description:
n/a
CRISPR Mechanism
CRISPRko

Vector Information:

Vector Backbone:
pXPR_003
Pol II Cassette 1:
EF1A-PuroR
Pol II Cassette 2:
n/a
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Additional Information:

Addgene ID:
76333

Gene matches for this target sequence (CRISPRko, PAM=NGG, human):

Reference Sequence Chromosome Cut Position Match Strand Match Gene Match Sequence PAM Seq. Mismatches[?] CFD Score[?] Match Tier[?]
1 NC_000007.14 7 106869267 + PIK3CG NNNTAACCCTCTCACAGCAG NGG 0 1.0 Tier I
2 NC_000021.9 21 46353274 + PCNT NNNTAACCCTGTTACAGCAG NGG 2 0.175 Tier I
3 NC_000007.14 7 111895346 + DOCK4 NNNTAACCCTATCACAGCAA NGG 2 0.7031 Tier II
4 NC_000001.11 1 223247529 + SUSD4 NNNTAACCTTCTTACAGCAG NGG 2 0.6125 Tier II
5 NC_000011.10 11 66866884 - PC NNNCAACCCTCTCACAGCTG NGG 2 0.3484 Tier II
6 NC_000006.12 6 79940693 + ELOVL4 NNNCAACCCTCTCACAGCAC NGG 2 0.2773 Tier II
7 NC_000010.11 10 132322033 + STK32C NNNACACCCTCTCACAGCAG NGG 2 0.2381 Tier II
8 NC_000001.11 1 19140725 + UBR4 NNNTTACACTCTCACAGCAG NGG 2 0.2364 Tier II
9 NC_000003.12 3 11644455 + VGLL4 NNNTCACCCTTTCACAGCAG NGG 2 0.1538 Tier II
10 NC_000006.12 6 93359129 - EPHA7 NNNTAACCCTCTCTCGGCAG NGG 2 0.1026 Tier II
11 NC_000009.12 9 136045395 - NACC2 NNNTAACCCTTTCCCAGCAG NGG 2 0.0659 Tier II
12 NC_000007.14 7 139297494 + UBN2 NNNTAACCCTCTCACAGCAT NTG 2 0.0273 Tier II
13 NC_000006.12 6 52564839 + TRAM2 NNNTAACCCTCTCAGGGCAG NGG 2 0.0096 Tier II
14 NC_000012.12 12 25109342 + DNAI7 NNNTAACCCTCTCAGAGGAG NGG 2 0.0067 Tier II
15 NC_000003.12 3 13601791 - FBLN2 NNNTAACCCTCTCACAGCAG NCA 2 0.0 Tier II
16 NC_000009.12 9 127754514 + SH2D3C NNNTAACCCTCTCACCGCCG NGG 2 0.0 Tier II
17 NC_000005.10 5 21022867 + LOC105374678 NNNTAAACCTCTCACAACAG NGG 2 0.7 Tier III
18 NC_000023.11 X 69062467 + LOC105373242 NNNTTGCCCTCTCACAGCAG NGG 2 0.2597 Tier III
19 NC_000003.12 3 34955832 - LOC101928135 NNNTCACCCTCTCACTGCAG NGG 2 0.0 Tier III
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Gene matches for this target sequence (CRISPRko, PAM=NGG, mouse):

Reference Sequence Chromosome Cut Position Match Strand Match Gene Match Sequence PAM Seq. Mismatches[?] CFD Score[?] Match Tier[?]
1 NC_000078.6 12 32204282 - Pik3cg NNNTAACCCCCTCACAGCAG NGG 1 0.5333 Tier I
2 NC_000070.6 4 136542879 + Luzp1 NNNTACCCCTCTGACAGCAG NGG 2 0.062 Tier I
3 NC_000076.6 10 80415524 - Tcf3 NNNTCACCCTCTCACAGCAG NGC 2 0.0111 Tier I
4 NC_000071.6 5 36172392 + Sorcs2 NNNTAATCCTCTCACAGCAA NGG 2 0.7617 Tier II
5 NC_000067.6 1 154424622 + Cacna1e NNNCAACCCTCCCACAGCAG NGG 2 0.613 Tier II
6 NC_000072.6 6 116400921 + Marchf8 NNNTATTCCTCTCACAGCAG NGG 2 0.5804 Tier II
7 NC_000071.6 5 123455291 - Mlxip NNNCGACCCTCTCACAGCAG NGG 2 0.4659 Tier II
8 NC_000076.6 10 110045631 - Nav3 NNNCAACCCTCGCACAGCAG NGG 2 0.3235 Tier II
9 NC_000068.7 2 62678542 + Gca NNNTTGCCCTCTCACAGCAG NGG 2 0.2597 Tier II
10 NC_000075.6 9 64449521 + Megf11 NNNTCAGCCTCTCACAGCAG NGG 2 0.2353 Tier II
11 NC_000069.6 3 65683459 - Lekr1 NNNTGACCCTTTCACAGCAG NGG 2 0.2215 Tier II
12 NC_000083.6 17 42599917 - Opn5 NNNTCACCCTCTCACAGCAG NAG 2 0.1296 Tier II
13 NC_000081.6 15 57944612 + Tbc1d31 NNNAAACCCTCTCACACCAG NGG 2 0.112 Tier II
14 NC_000076.6 10 70994670 + Bicc1 NNNTAAGCCTCTCAAAGCAG NGG 2 0.1046 Tier II
15 NC_000067.6 1 190168335 + Prox1 NNNAAACCCTCTCACGGCAG NGG 2 0.0916 Tier II
16 NC_000075.6 9 104095807 - Acad11 NNNGAACCCTCTCACAGGAG NGG 2 0.0833 Tier II
17 NC_000072.6 6 97118321 - Eogt NNNTAGCCCTCTCACAGCAG NTG 2 0.0278 Tier II
18 NC_000077.6 11 56048171 - LOC115485826 NNNTATCCCTCTCACAACAG NGG 2 0.6667 Tier III
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Other clones with same target sequence:

(none)