Construct: shRNA TRCN0000000054

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_006802.x-2486s1c1
DNA Barcode:
CATGTTCTCCAATCCCAGGTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SF3A3 (10946)
Gene Description:
splicing factor 3a subunit 3
Transcript:
RefSeq NM_006802.1 (NON-CURRENT)
Match location:
Position 2486 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000000054)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CATGTTCTCCAATCCCAGGTA
Hairpin Sequence:
5'-CCGG-CATGTTCTCCAATCCCAGGTA-CTCGAG-TACCTGGGATTGGAGAACATG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCATGTTCTCCAATCCCAGGTACTCGAGTACCTGGGATTGGAGAACATGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACATGTTCTCCAATCCCAGGTACTCGAGTACCTGGGATTGGAGAACATG-3'

Other clones with same target sequence:

(none)