Construct: shRNA TRCN0000000390

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_000222.x-311s1c1
DNA Barcode:
GCACCAACAAACACGGCTTAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
KIT (3815)
Gene Description:
KIT proto-oncogene, receptor tyrosine kinase
Transcript:
RefSeq NM_000222.1 (NON-CURRENT)
Match location:
Position 311 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000000390)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCACCAACAAACACGGCTTAA
Hairpin Sequence:
5'-CCGG-GCACCAACAAACACGGCTTAA-CTCGAG-TTAAGCCGTGTTTGTTGGTGC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCACCAACAAACACGGCTTAACTCGAGTTAAGCCGTGTTTGTTGGTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCACCAACAAACACGGCTTAACTCGAGTTAAGCCGTGTTTGTTGGTGC-3'

Other clones with same target sequence:

(none)