Construct: shRNA TRCN0000001089

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_006491.x-475s1c1
DNA Barcode:
CAGACCACCGTTAATCCAGAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
NOVA1 (4857)
Gene Description:
NOVA alternative splicing regulator 1
Transcript:
RefSeq NM_006491.1 (NON-CURRENT)
Match location:
Position 475 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000001089)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAGACCACCGTTAATCCAGAT
Hairpin Sequence:
5'-CCGG-CAGACCACCGTTAATCCAGAT-CTCGAG-ATCTGGATTAACGGTGGTCTG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAGACCACCGTTAATCCAGATCTCGAGATCTGGATTAACGGTGGTCTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAGACCACCGTTAATCCAGATCTCGAGATCTGGATTAACGGTGGTCTG-3'

Other clones with same target sequence:

  1. TRCN0000272891