Construct: shRNA TRCN0000001120
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_178001.x-589s1c1
- DNA Barcode:
- GCCATTGAGAAACTAGTCGCT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- PTPA (5524)
- Gene Description:
- protein phosphatase 2 phosphatase activator
- Transcript:
- RefSeq NM_178001.1 (NON-CURRENT)
- Match location:
- Position 589 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000001120)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCATTGAGAAACTAGTCGCT
- Hairpin Sequence:
-
5'-CCGG-GCCATTGAGAAACTAGTCGCT-CTCGAG-AGCGACTAGTTTCTCAATGGC-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCATTGAGAAACTAGTCGCTCTCGAGAGCGACTAGTTTCTCAATGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCATTGAGAAACTAGTCGCTCTCGAGAGCGACTAGTTTCTCAATGGC-3'
Other clones with same target sequence:
(none)
