Construct: shRNA TRCN0000001238

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005826.x-2178s1c1
DNA Barcode:
CTCTTGGACATTATTGGGCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
HNRNPR (10236)
Gene Description:
heterogeneous nuclear ribonucleoprotein R
Transcript:
RefSeq NM_005826.2 (NON-CURRENT)
Match location:
Position 2178 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000001238)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTCTTGGACATTATTGGGCTT
Hairpin Sequence:
5'-CCGG-CTCTTGGACATTATTGGGCTT-CTCGAG-AAGCCCAATAATGTCCAAGAG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTCTTGGACATTATTGGGCTTCTCGAGAAGCCCAATAATGTCCAAGAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTCTTGGACATTATTGGGCTTCTCGAGAAGCCCAATAATGTCCAAGAG-3'

Other clones with same target sequence:

(none)