Construct: shRNA TRCN0000002146

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004734.x-2643s1c1
DNA Barcode:
CAGGTATCTTTGTAGCGGTTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
DCLK1 (9201)
Gene Description:
doublecortin like kinase 1
Transcript:
RefSeq NM_004734.1 (NON-CURRENT)
Match location:
Position 2643 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000002146)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAGGTATCTTTGTAGCGGTTT
Hairpin Sequence:
5'-CCGG-CAGGTATCTTTGTAGCGGTTT-CTCGAG-AAACCGCTACAAAGATACCTG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAGGTATCTTTGTAGCGGTTTCTCGAGAAACCGCTACAAAGATACCTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAGGTATCTTTGTAGCGGTTTCTCGAGAAACCGCTACAAAGATACCTG-3'

Other clones with same target sequence:

(none)