Construct: shRNA TRCN0000002858

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002840.x-2670s1c1
DNA Barcode:
CCGAGGACTATGAAACCACTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PTPRF (5792)
Gene Description:
protein tyrosine phosphatase receptor type F
Transcript:
RefSeq NM_002840.2 (NON-CURRENT)
Match location:
Position 2670 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000002858)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGAGGACTATGAAACCACTA
Hairpin Sequence:
5'-CCGG-CCGAGGACTATGAAACCACTA-CTCGAG-TAGTGGTTTCATAGTCCTCGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGAGGACTATGAAACCACTACTCGAGTAGTGGTTTCATAGTCCTCGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGAGGACTATGAAACCACTACTCGAGTAGTGGTTTCATAGTCCTCGG-3'

Other clones with same target sequence:

(none)