Construct: shRNA TRCN0000003827

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001760.x-379s1c1
DNA Barcode:
CGCTGTGAGGAGGAAGTCTTC

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CCND3 (896)
Gene Description:
cyclin D3
Transcript:
RefSeq NM_001760.2 (NON-CURRENT)
Match location:
Position 379 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000003827)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGCTGTGAGGAGGAAGTCTTC
Hairpin Sequence:
5'-CCGG-CGCTGTGAGGAGGAAGTCTTC-CTCGAG-GAAGACTTCCTCCTCACAGCG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGCTGTGAGGAGGAAGTCTTCCTCGAGGAAGACTTCCTCCTCACAGCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGCTGTGAGGAGGAAGTCTTCCTCGAGGAAGACTTCCTCCTCACAGCG-3'

Other clones with same target sequence:

  1. TRCN0000338377