Construct: shRNA TRCN0000004373

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_013438.x-2894s1c1
DNA Barcode:
GCTTCTCCCATAGGTAGTTTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
UBQLN1 (29979)
Gene Description:
ubiquilin 1
Transcript:
RefSeq NM_013438.2 (NON-CURRENT)
Match location:
Position 2894 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000004373)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTTCTCCCATAGGTAGTTTA
Hairpin Sequence:
5'-CCGG-GCTTCTCCCATAGGTAGTTTA-CTCGAG-TAAACTACCTATGGGAGAAGC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTTCTCCCATAGGTAGTTTACTCGAGTAAACTACCTATGGGAGAAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTTCTCCCATAGGTAGTTTACTCGAGTAAACTACCTATGGGAGAAGC-3'

Other clones with same target sequence:

(none)