Construct: shRNA TRCN0000004913

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002542.4-1555s1c1
DNA Barcode:
CGCAAGTACTTCCAGCTAGAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
OGG1 (4968)
Gene Description:
8-oxoguanine DNA glycosylase
Transcript:
RefSeq NM_002542.4 (NON-CURRENT)
Match location:
Position 1555 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000004913)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGCAAGTACTTCCAGCTAGAT
Hairpin Sequence:
5'-CCGG-CGCAAGTACTTCCAGCTAGAT-CTCGAG-ATCTAGCTGGAAGTACTTGCG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGCAAGTACTTCCAGCTAGATCTCGAGATCTAGCTGGAAGTACTTGCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGCAAGTACTTCCAGCTAGATCTCGAGATCTAGCTGGAAGTACTTGCG-3'

Other clones with same target sequence:

  1. TRCN0000314739