Construct: shRNA TRCN0000005400
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_172241.1-1427s1c1
- DNA Barcode:
- GCTGAAAGAAACCTCAATGAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- CTAGE1 (64693)
- Gene Description:
- cutaneous T cell lymphoma-associated antigen 1
- Transcript:
- RefSeq NM_172241.1 (NON-CURRENT)
- Match location:
- Position 1427 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000005400)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCTGAAAGAAACCTCAATGAT
- Hairpin Sequence:
-
5'-CCGG-GCTGAAAGAAACCTCAATGAT-CTCGAG-ATCATTGAGGTTTCTTTCAGC-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCTGAAAGAAACCTCAATGATCTCGAGATCATTGAGGTTTCTTTCAGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCTGAAAGAAACCTCAATGATCTCGAGATCATTGAGGTTTCTTTCAGC-3'
Other clones with same target sequence:
(none)
