Construct: shRNA TRCN0000008494
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_010480.2-1169s1c1
- DNA Barcode:
- CCTGAGTATCTGAATTTCATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Hsp90aa1 (15519)
- Gene Description:
- heat shock protein 90, alpha (cytosolic), class A member 1
- Transcript:
- RefSeq NM_010480.2 (NON-CURRENT)
- Match location:
- Position 1169 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000008494)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTGAGTATCTGAATTTCATT
- Hairpin Sequence:
-
5'-CCGG-CCTGAGTATCTGAATTTCATT-CTCGAG-AATGAAATTCAGATACTCAGG-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTGAGTATCTGAATTTCATTCTCGAGAATGAAATTCAGATACTCAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTGAGTATCTGAATTTCATTCTCGAGAATGAAATTCAGATACTCAGG-3'
Other clones with same target sequence:
-
TRCN0000321007
