Construct: shRNA TRCN0000009053
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_001526.2-1674s1c1
- DNA Barcode:
- TGACAAGGATACCTGAGTAAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- HCRTR2 (3062)
- Gene Description:
- hypocretin receptor 2
- Transcript:
- RefSeq NM_001526.2 (NON-CURRENT)
- Match location:
- Position 1674 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000009053)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- TGACAAGGATACCTGAGTAAA
- Hairpin Sequence:
-
5'-CCGG-TGACAAGGATACCTGAGTAAA-CTCGAG-TTTACTCAGGTATCCTTGTCA-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGTGACAAGGATACCTGAGTAAACTCGAGTTTACTCAGGTATCCTTGTCATTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAATGACAAGGATACCTGAGTAAACTCGAGTTTACTCAGGTATCCTTGTCA-3'
Other clones with same target sequence:
(none)
