Construct: shRNA TRCN0000011456

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_000440.1-1285s1c1
DNA Barcode:
CCGATTGTGAACAAGAAGGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PDE6A (5145)
Gene Description:
phosphodiesterase 6A
Transcript:
RefSeq NM_000440.1 (NON-CURRENT)
Match location:
Position 1285 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000011456)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGATTGTGAACAAGAAGGAA
Hairpin Sequence:
5'-CCGG-CCGATTGTGAACAAGAAGGAA-CTCGAG-TTCCTTCTTGTTCACAATCGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGATTGTGAACAAGAAGGAACTCGAGTTCCTTCTTGTTCACAATCGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGATTGTGAACAAGAAGGAACTCGAGTTCCTTCTTGTTCACAATCGG-3'

Other clones with same target sequence:

(none)