Construct: shRNA TRCN0000012443

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_080553.1-1714s1c1
DNA Barcode:
CCTGCTTAGTACCGTTGAAGA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Itpr3 (16440)
Gene Description:
inositol 1,4,5-triphosphate receptor 3
Transcript:
RefSeq NM_080553.1 (NON-CURRENT)
Match location:
Position 1714 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000012443)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGCTTAGTACCGTTGAAGA
Hairpin Sequence:
5'-CCGG-CCTGCTTAGTACCGTTGAAGA-CTCGAG-TCTTCAACGGTACTAAGCAGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGCTTAGTACCGTTGAAGACTCGAGTCTTCAACGGTACTAAGCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGCTTAGTACCGTTGAAGACTCGAGTCTTCAACGGTACTAAGCAGG-3'

Other clones with same target sequence:

(none)