Construct: shRNA TRCN0000014992

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_012421.1-5542s1c1
DNA Barcode:
CCACCTTTAATAGTAGCTGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
RLF (6018)
Gene Description:
rearranged L-myc fusion
Transcript:
RefSeq NM_012421.1 (NON-CURRENT)
Match location:
Position 5542 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000014992)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCACCTTTAATAGTAGCTGAA
Hairpin Sequence:
5'-CCGG-CCACCTTTAATAGTAGCTGAA-CTCGAG-TTCAGCTACTATTAAAGGTGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCACCTTTAATAGTAGCTGAACTCGAGTTCAGCTACTATTAAAGGTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCACCTTTAATAGTAGCTGAACTCGAGTTCAGCTACTATTAAAGGTGG-3'

Other clones with same target sequence:

(none)