Construct: shRNA TRCN0000015152

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005069.2-415s1c1
DNA Barcode:
CGGGCAACAGTATTTATGAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SIM2 (6493)
Gene Description:
SIM bHLH transcription factor 2
Transcript:
RefSeq NM_005069.2 (NON-CURRENT)
Match location:
Position 415 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000015152)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGGGCAACAGTATTTATGAAT
Hairpin Sequence:
5'-CCGG-CGGGCAACAGTATTTATGAAT-CTCGAG-ATTCATAAATACTGTTGCCCG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGGGCAACAGTATTTATGAATCTCGAGATTCATAAATACTGTTGCCCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGGGCAACAGTATTTATGAATCTCGAGATTCATAAATACTGTTGCCCG-3'

Other clones with same target sequence:

(none)