Construct: shRNA TRCN0000015716

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_024015.3-453s1c1
DNA Barcode:
CCGTCCCACTCCGCGTGCAAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
HOXB4 (3214)
Gene Description:
homeobox B4
Transcript:
RefSeq NM_024015.3 (NON-CURRENT)
Match location:
Position 453 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000015716)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGTCCCACTCCGCGTGCAAA
Hairpin Sequence:
5'-CCGG-CCGTCCCACTCCGCGTGCAAA-CTCGAG-TTTGCACGCGGAGTGGGACGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGTCCCACTCCGCGTGCAAACTCGAGTTTGCACGCGGAGTGGGACGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGTCCCACTCCGCGTGCAAACTCGAGTTTGCACGCGGAGTGGGACGG-3'

Other clones with same target sequence:

(none)