Construct: shRNA TRCN0000016346

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_203282.1-1572s1c1
DNA Barcode:
CACTGGAGAGAAACCCTACAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ZNF539 (399655)
Gene Description:
zinc finger protein 539
Transcript:
RefSeq NM_203282.1 (NON-CURRENT)
Match location:
Position 1572 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000016346)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CACTGGAGAGAAACCCTACAA
Hairpin Sequence:
5'-CCGG-CACTGGAGAGAAACCCTACAA-CTCGAG-TTGTAGGGTTTCTCTCCAGTG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCACTGGAGAGAAACCCTACAACTCGAGTTGTAGGGTTTCTCTCCAGTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACACTGGAGAGAAACCCTACAACTCGAGTTGTAGGGTTTCTCTCCAGTG-3'

Other clones with same target sequence:

(none)