Construct: shRNA TRCN0000016403

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_032495.3-340s1c1
DNA Barcode:
CCAGGTGGAAATCCTGGAGTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
HOPX (84525)
Gene Description:
HOP homeobox
Transcript:
RefSeq NM_032495.3 (NON-CURRENT)
Match location:
Position 340 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000016403)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAGGTGGAAATCCTGGAGTA
Hairpin Sequence:
5'-CCGG-CCAGGTGGAAATCCTGGAGTA-CTCGAG-TACTCCAGGATTTCCACCTGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAGGTGGAAATCCTGGAGTACTCGAGTACTCCAGGATTTCCACCTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAGGTGGAAATCCTGGAGTACTCGAGTACTCCAGGATTTCCACCTGG-3'

Other clones with same target sequence:

(none)