Construct: shRNA TRCN0000016626
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_377877.1-49s1c1
- DNA Barcode:
- CTAGACGGGAACTTGGAAGCA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- LOC402200 (402200)
- Gene Description:
- similar to Transcription initiation factor TFIID subunit 11 (Transcription initiation factor TFIID 28 kDa subunit) (TAF(II)28) (TAFII-28) (TAFII28) (TFIID subunit p30-beta)
- Transcript:
- RefSeq XM_377877.1 (NON-CURRENT)
- Match location:
- Position 49 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000016626)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CTAGACGGGAACTTGGAAGCA
- Hairpin Sequence:
-
5'-CCGG-CTAGACGGGAACTTGGAAGCA-CTCGAG-TGCTTCCAAGTTCCCGTCTAG-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCTAGACGGGAACTTGGAAGCACTCGAGTGCTTCCAAGTTCCCGTCTAGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACTAGACGGGAACTTGGAAGCACTCGAGTGCTTCCAAGTTCCCGTCTAG-3'
Other clones with same target sequence:
(none)
