Construct: shRNA TRCN0000016700
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_376763.1-348s1c1
- DNA Barcode:
- GAGGACCAACTCTGAAAGAGA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- COE2 (90868)
- Gene Description:
- similar to TRANSCRIPTION FACTOR COE2
- Transcript:
- RefSeq XM_376763.1 (NON-CURRENT)
- Match location:
- Position 348 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000016700)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GAGGACCAACTCTGAAAGAGA
- Hairpin Sequence:
-
5'-CCGG-GAGGACCAACTCTGAAAGAGA-CTCGAG-TCTCTTTCAGAGTTGGTCCTC-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGAGGACCAACTCTGAAAGAGACTCGAGTCTCTTTCAGAGTTGGTCCTCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGAGGACCAACTCTGAAAGAGACTCGAGTCTCTTTCAGAGTTGGTCCTC-3'
Other clones with same target sequence:
(none)
