Construct: shRNA TRCN0000017984

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_370669.1-412s1c1
DNA Barcode:
GCATACTCTCTGGGCAAAGTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
NANOGNB (360030)
Gene Description:
NANOG neighbor homeobox
Transcript:
RefSeq XM_370669.1 (NON-CURRENT)
Match location:
Position 412 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000017984)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCATACTCTCTGGGCAAAGTT
Hairpin Sequence:
5'-CCGG-GCATACTCTCTGGGCAAAGTT-CTCGAG-AACTTTGCCCAGAGAGTATGC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCATACTCTCTGGGCAAAGTTCTCGAGAACTTTGCCCAGAGAGTATGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCATACTCTCTGGGCAAAGTTCTCGAGAACTTTGCCCAGAGAGTATGC-3'

Other clones with same target sequence:

(none)