Construct: shRNA TRCN0000018134

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_168302.4-475s1c1
DNA Barcode:
CCAGAAATAAACACCAAGGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ZKSCAN1 (7586)
Gene Description:
zinc finger with KRAB and SCAN domains 1
Transcript:
RefSeq XM_168302.4 (NON-CURRENT)
Match location:
Position 475 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000018134)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAGAAATAAACACCAAGGAA
Hairpin Sequence:
5'-CCGG-CCAGAAATAAACACCAAGGAA-CTCGAG-TTCCTTGGTGTTTATTTCTGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAGAAATAAACACCAAGGAACTCGAGTTCCTTGGTGTTTATTTCTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAGAAATAAACACCAAGGAACTCGAGTTCCTTGGTGTTTATTTCTGG-3'

Other clones with same target sequence:

(none)