Construct: shRNA TRCN0000018754

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_145128.2-2216s1c1
DNA Barcode:
CCTCTGCAAAGACTGCCTATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Mgat5 (107895)
Gene Description:
mannoside acetylglucosaminyltransferase 5
Transcript:
RefSeq NM_145128.2 (NON-CURRENT)
Match location:
Position 2216 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000018754)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTCTGCAAAGACTGCCTATA
Hairpin Sequence:
5'-CCGG-CCTCTGCAAAGACTGCCTATA-CTCGAG-TATAGGCAGTCTTTGCAGAGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTCTGCAAAGACTGCCTATACTCGAGTATAGGCAGTCTTTGCAGAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTCTGCAAAGACTGCCTATACTCGAGTATAGGCAGTCTTTGCAGAGG-3'

Other clones with same target sequence:

(none)