Construct: shRNA TRCN0000018790

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_020283.1-666s1c1
DNA Barcode:
GCCTAGAGATTTGTACCCTGA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
B3galt1 (26877)
Gene Description:
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
Transcript:
RefSeq NM_020283.1 (NON-CURRENT)
Match location:
Position 666 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000018790)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTAGAGATTTGTACCCTGA
Hairpin Sequence:
5'-CCGG-GCCTAGAGATTTGTACCCTGA-CTCGAG-TCAGGGTACAAATCTCTAGGC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTAGAGATTTGTACCCTGACTCGAGTCAGGGTACAAATCTCTAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTAGAGATTTGTACCCTGACTCGAGTCAGGGTACAAATCTCTAGGC-3'

Other clones with same target sequence:

(none)