Construct: shRNA TRCN0000018893

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_000383.1-260s1c1
DNA Barcode:
GAGACGCTTCATCTGAAGGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
AIRE (326)
Gene Description:
autoimmune regulator
Transcript:
RefSeq NM_000383.1 (NON-CURRENT)
Match location:
Position 260 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000018893)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAGACGCTTCATCTGAAGGAA
Hairpin Sequence:
5'-CCGG-GAGACGCTTCATCTGAAGGAA-CTCGAG-TTCCTTCAGATGAAGCGTCTC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAGACGCTTCATCTGAAGGAACTCGAGTTCCTTCAGATGAAGCGTCTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAGACGCTTCATCTGAAGGAACTCGAGTTCCTTCAGATGAAGCGTCTC-3'

Other clones with same target sequence:

(none)