Construct: shRNA TRCN0000018917

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001556.1-1107s1c1
DNA Barcode:
GCTGGTTCATATCTTGAACAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
IKBKB (3551)
Gene Description:
inhibitor of nuclear factor kappa B kinase subunit beta
Transcript:
RefSeq NM_001556.1 (NON-CURRENT)
Match location:
Position 1107 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000018917)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTGGTTCATATCTTGAACAT
Hairpin Sequence:
5'-CCGG-GCTGGTTCATATCTTGAACAT-CTCGAG-ATGTTCAAGATATGAACCAGC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTGGTTCATATCTTGAACATCTCGAGATGTTCAAGATATGAACCAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTGGTTCATATCTTGAACATCTCGAGATGTTCAAGATATGAACCAGC-3'

Other clones with same target sequence:

  1. TRCN0000329735