Construct: shRNA TRCN0000019468

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016169.2-1451s1c1
DNA Barcode:
GACCGAAGAGTTTGTAGAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SUFU (51684)
Gene Description:
SUFU negative regulator of hedgehog signaling
Transcript:
RefSeq NM_016169.2 (NON-CURRENT)
Match location:
Position 1451 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000019468)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GACCGAAGAGTTTGTAGAGAA
Hairpin Sequence:
5'-CCGG-GACCGAAGAGTTTGTAGAGAA-CTCGAG-TTCTCTACAAACTCTTCGGTC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGACCGAAGAGTTTGTAGAGAACTCGAGTTCTCTACAAACTCTTCGGTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGACCGAAGAGTTTGTAGAGAACTCGAGTTCTCTACAAACTCTTCGGTC-3'

Other clones with same target sequence:

(none)