Construct: shRNA TRCN0000019945

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002431.1-891s1c1
DNA Barcode:
GCTATACTTCTTCTCTTGCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
MNAT1 (4331)
Gene Description:
MNAT1 component of CDK activating kinase
Transcript:
RefSeq NM_002431.1 (NON-CURRENT)
Match location:
Position 891 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000019945)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTATACTTCTTCTCTTGCTT
Hairpin Sequence:
5'-CCGG-GCTATACTTCTTCTCTTGCTT-CTCGAG-AAGCAAGAGAAGAAGTATAGC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTATACTTCTTCTCTTGCTTCTCGAGAAGCAAGAGAAGAAGTATAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTATACTTCTTCTCTTGCTTCTCGAGAAGCAAGAGAAGAAGTATAGC-3'

Other clones with same target sequence:

  1. TRCN0000278491