Construct: shRNA TRCN0000020046

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_022114.2-3759s1c1
DNA Barcode:
CAGGCTAAGAACCAGGCATAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PRDM16 (63976)
Gene Description:
PR/SET domain 16
Transcript:
RefSeq NM_022114.2 (NON-CURRENT)
Match location:
Position 3759 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000020046)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAGGCTAAGAACCAGGCATAT
Hairpin Sequence:
5'-CCGG-CAGGCTAAGAACCAGGCATAT-CTCGAG-ATATGCCTGGTTCTTAGCCTG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAGGCTAAGAACCAGGCATATCTCGAGATATGCCTGGTTCTTAGCCTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAGGCTAAGAACCAGGCATATCTCGAGATATGCCTGGTTCTTAGCCTG-3'

Other clones with same target sequence:

(none)