Construct: shRNA TRCN0000020146
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_021014.2-165s1c1
- DNA Barcode:
- CCTTCGATGATATTGCCAAAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- SSX3 (10214)
- Gene Description:
- SSX family member 3
- Transcript:
- RefSeq NM_021014.2 (NON-CURRENT)
- Match location:
- Position 165 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000020146)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTTCGATGATATTGCCAAAT
- Hairpin Sequence:
-
5'-CCGG-CCTTCGATGATATTGCCAAAT-CTCGAG-ATTTGGCAATATCATCGAAGG-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTTCGATGATATTGCCAAATCTCGAGATTTGGCAATATCATCGAAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTTCGATGATATTGCCAAATCTCGAGATTTGGCAATATCATCGAAGG-3'
Other clones with same target sequence:
(none)
