Construct: shRNA TRCN0000020825
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_018179.3-2562s1c1
- DNA Barcode:
- CCAGGGACTTTGGTGACTAAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- ATF7IP (55729)
- Gene Description:
- activating transcription factor 7 interacting protein
- Transcript:
- RefSeq NM_018179.3 (NON-CURRENT)
- Match location:
- Position 2562 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000020825)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAGGGACTTTGGTGACTAAT
- Hairpin Sequence:
-
5'-CCGG-CCAGGGACTTTGGTGACTAAT-CTCGAG-ATTAGTCACCAAAGTCCCTGG-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAGGGACTTTGGTGACTAATCTCGAGATTAGTCACCAAAGTCCCTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAGGGACTTTGGTGACTAATCTCGAGATTAGTCACCAAAGTCCCTGG-3'
Other clones with same target sequence:
(none)
