Construct: shRNA TRCN0000021549

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005975.2-1866s1c1
DNA Barcode:
CCTGTTTGTCTTGTGTCTTGA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PTK6 (5753)
Gene Description:
protein tyrosine kinase 6
Transcript:
RefSeq NM_005975.2 (NON-CURRENT)
Match location:
Position 1866 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000021549)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGTTTGTCTTGTGTCTTGA
Hairpin Sequence:
5'-CCGG-CCTGTTTGTCTTGTGTCTTGA-CTCGAG-TCAAGACACAAGACAAACAGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGTTTGTCTTGTGTCTTGACTCGAGTCAAGACACAAGACAAACAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGTTTGTCTTGTGTCTTGACTCGAGTCAAGACACAAGACAAACAGG-3'

Other clones with same target sequence:

(none)