Construct: shRNA TRCN0000021689
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_003147.4-801s1c1
- DNA Barcode:
- CCTGAGGAAGATGACGAGTAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- SSX2 (6757)
- Gene Description:
- SSX family member 2
- Transcript:
- RefSeq NM_003147.4 (NON-CURRENT)
- Match location:
- Position 801 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000021689)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTGAGGAAGATGACGAGTAA
- Hairpin Sequence:
-
5'-CCGG-CCTGAGGAAGATGACGAGTAA-CTCGAG-TTACTCGTCATCTTCCTCAGG-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTGAGGAAGATGACGAGTAACTCGAGTTACTCGTCATCTTCCTCAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTGAGGAAGATGACGAGTAACTCGAGTTACTCGTCATCTTCCTCAGG-3'
Other clones with same target sequence:
(none)
